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Longer titles found: Tandem repeat locus (view), Variable number tandem repeat (view), List of protein tandem repeat annotation software (view), Protein tandem repeats (view)

searching for Tandem repeat 182 found (324 total)

alternate case: tandem repeat

STR analysis (1,508 words) [view diff] exact match in snippet view article find links to article

Short tandem repeat (STR) analysis is a common molecular biology method used to compare allele repeats at specific loci in DNA between two or more samples

CVNH domain (339 words) [view diff] exact match in snippet view article find links to article

haemagglutinin. CV-N has a complex fold composed of a duplication of a tandem repeat of two homologous motifs comprising three-stranded beta sheet and beta

List of genetic genealogy topics (151 words) [view diff] exact match in snippet view article find links to article

recent common ancestor Short tandem repeat (STR) Single nucleotide polymorphism (SNP) Y-STR (Y-chromosome short tandem repeat) Archaeogenetics Genealogy

Listeria Hfq binding LhrC (388 words) [view diff] exact match in snippet view article find links to article

lhrC have been identified in the genome, three of which are located in tandem repeat upstream of the originally characterised lhrC. This RNA molecule appears

Procyclin (339 words) [view diff] exact match in snippet view article find links to article

or seven procyclin genes that encode unusual proteins with extensive tandem repeat units of glutamic acid (E) and proline (P), referred to as EP repeats

List of biology websites (649 words) [view diff] case mismatch in snippet view article find links to article

- the natural step in managing populational data reported for Short Tandem Repeat (STR) loci from all over the world... Encyclopedia of Life (EOL) - with

ALMS1 (1,394 words) [view diff] no match in snippet view article find links to article

mitosis it localizes to both spindle poles. The protein has a large tandem-repeat domain comprising 34 imperfect repetitions of 47 amino acids as well

C. Thomas Caskey (1,165 words) [view diff] exact match in snippet view article find links to article

molecular basis of disease "anticipation" as an expansion of short tandem repeat DNA sequences causative of FragileX, Myotonic Dystrophy, Ataxia, and

Cellosaurus (651 words) [view diff] exact match in snippet view article find links to article

tables. For human as well as some dog cell lines, it provides short tandem repeat (STR) profile information. Since July 2018, cell lines in the Cellosaurus

Second Generation Multiplex (115 words) [view diff] case mismatch in snippet view article find links to article

(Applied Biosystems). It contains primers for the following STR (Short Tandem Repeat) loci: VWA (HUMVWF31/A), D8 (D8S1179), D21 (D21S11), D18 (D18S51), THO

TPSD1 (537 words) [view diff] exact match in snippet view article find links to article

distinct features. They have a highly conserved 3' UTR and contain tandem repeat sequences at the 5' flank and 3' UTR which are thought to play a role

JPH3 (818 words) [view diff] exact match in snippet view article find links to article

various genes can cause polyglutamine diseases. The expansion of the CAG tandem repeat in JPH3 is associated with the HDL2's type of Huntington's disease-like

Strbase (87 words) [view diff] exact match in snippet view article find links to article

Ruitberg, C M; Reeder D J; Butler J M (Jan 2001). "STRBase: a short tandem repeat DNA database for the human identity testing community". Nucleic Acids

DXZ4 (516 words) [view diff] exact match in snippet view article find links to article

populations (varying between 50 and 100 copies). DXZ4 is one of many large tandem repeat loci defined as macrosatellites. Several macrosatellites have been described

DNA Specimen Provenance Assignment (969 words) [view diff] exact match in snippet view article find links to article

published in the Journal of Urology. A panel of 16 microsatellite short tandem repeat (STR) markers that recognizes highly variable loci of human DNA is used

GALNT1 (901 words) [view diff] exact match in snippet view article find links to article

fragments from lactation-associated MUC1. All putative sites within the tandem repeat are glycosylation targets in vivo". J. Biol. Chem. 272 (40): 24780–93

John M. Butler (scientist) (629 words) [view diff] exact match in snippet view article

using time-of-flight mass spectrometry for the separation of short tandem repeat markers. Since 2000, Butler works at the NIST, first as project leader

Methanosarcinales S-layer Tile Protein (1,515 words) [view diff] exact match in snippet view article find links to article

Methanomicrobia members of the order Methanosarcinales. Typically a tandem repeat of two DUF1608 domains are contained in a single MSTP protein chain

Trisomy (680 words) [view diff] exact match in snippet view article find links to article

Trisomy Example of trisomy 21 (Down syndrome) detected via qPCR short tandem repeat analysis Specialty Medical genetics

Haplogroup G-M285 (2,191 words) [view diff] exact match in snippet view article find links to article

China (Anhui). Almost all G1 persons have the value of 12 at short tandem repeat (STR) marker DYS392 and all will have the M285 SNP mutation which characterizes

WiCell (560 words) [view diff] case mismatch in snippet view article find links to article

clones and a cost-effective tool for monitoring aneuploidy; and Short Tandem Repeat Analysis, which may be used to monitor the identity of a cell line and

Link domain (440 words) [view diff] exact match in snippet view article find links to article

termed HABM (hyaluronic acid binding module) and PTR (proteoglycan tandem repeat). Proteins which contain the link domain include: the hyalectans (a

BioNumerics (483 words) [view diff] exact match in snippet view article find links to article

Santen-Verheuvel MG, et al. (2009-04-03). "Multiple-locus variable number tandem repeat analysis of Staphylococcus aureus: comparison with pulsed-field gel

List of X-STR markers (27 words) [view diff] case mismatch in snippet view article find links to article

following X-STR markers are used in genealogical DNA testing and other forms of relationship testing. Short Tandem Repeat X-STR List of Y-STR markers

Snptstr (database) (68 words) [view diff] exact match in snippet view article

microsatellite with one or more tightly linked SNPs). Snpstr Short tandem repeat Microsatellite Single-nucleotide polymorphism Agrafioti, I; Stumpf M

Mucin 4 (2,092 words) [view diff] exact match in snippet view article find links to article

variants are likely artefactual. Many polymorphisms are observed in the tandem repeat region of the alpha subunit, which has a variable number of repeats

ATCC (company) (1,066 words) [view diff] exact match in snippet view article

and Technology (NIST) to establish standards and a database for short tandem repeat (STR) sequences in mouse and human cell lines. In 2019, ATCC began hosting

Mucin 17 (434 words) [view diff] exact match in snippet view article find links to article

"Molecular cloning of human MUC3 cDNA reveals a novel 59 amino acid tandem repeat region". Biochem. Biophys. Res. Commun. 238 (1): 143–148. doi:10.1006/bbrc

GALNT2 (803 words) [view diff] exact match in snippet view article find links to article

fragments from lactation-associated MUC1. All putative sites within the tandem repeat are glycosylation targets in vivo". J. Biol. Chem. 272 (40): 24780–93

Y-SNP (213 words) [view diff] exact match in snippet view article find links to article

Laboratory at Stanford University, which uses the letter M. Mt-SNP Short tandem repeat Haplogroup Haplotype Genealogical DNA test Lindner, Iris; von Wurmb-Schwark

Polyvalency (chemistry) (435 words) [view diff] no match in snippet view article

Galbeta1-terminated core saccharides on the binding of domain-I of recombinant tandem-repeat-type galectin-4 from rat gastrointestinal tract (G4-N)". Biochimie.

Haplogroup G-M201 (7,316 words) [view diff] exact match in snippet view article find links to article

the Avellaner men had rare marker values in testing of their short tandem repeat (STR) markers. During the Chalcolithic, haplogroup G was considered

Hypervariable region (884 words) [view diff] exact match in snippet view article find links to article

Consortium; Chaisson, MJP (12 July 2021). "Profiling variable-number tandem repeat variation across populations using repeat-pangenome graphs". Nature

Tauopathy (2,037 words) [view diff] exact match in snippet view article find links to article

presence of either three (3R tau isoforms) or four (4R tau isoforms) tandem repeat sequences each consisting of 31 or 32 amino acids. Positron emission

WH2 motif (417 words) [view diff] exact match in snippet view article find links to article

domain and with the CRIB domain, and the WH2 domain can occur as a tandem repeat. The WH2 domain binds to actin monomers and can facilitate the assembly

Mt-SNP (193 words) [view diff] exact match in snippet view article find links to article

which uses the letter M. Y-SNP Single-nucleotide polymorphism Short tandem repeat Haplogroup Haplotype Genealogical DNA test Chaitanya, Lakshmi; Van Oven

Eukaryotic chromosome fine structure (989 words) [view diff] exact match in snippet view article find links to article

is a microsatellite, but its function is more specific than a simple tandem repeat. Throughout the eukaryotic kingdom, the overall structure of chromosome

Molecular marker (1,376 words) [view diff] case mismatch in snippet view article find links to article

DNA RAPD Amplified Fragment Length Polymorphism AFLP Variable Number Tandem Repeat VNTR Oligonucleotide Polymorphism OP Single Nucleotide Polymorphism

Restriction digest (954 words) [view diff] exact match in snippet view article find links to article

polymorphism AFLP – Amplified fragment length polymorphism STRP – Short tandem repeat polymorphism In order to perform restriction digest by gel electrophoresis

Othram (4,518 words) [view diff] exact match in snippet view article find links to article

individuals, closely and distantly related, through a combination of short tandem repeat and single nucleotide polymorphism testing, as well as forensic genome

Lineage markers (244 words) [view diff] exact match in snippet view article find links to article

Lineage markers include mitochondrial DNA (mtDNA) and Y-chromosome short tandem repeat (Y-STR) haplotypes that are transferred directly from generation to

FUT2 (1,728 words) [view diff] exact match in snippet view article find links to article

Soejima M, Koda Y, Kimura H (October 2004). "A novel tetrameric short tandem repeat located in the 3' flanking region of the human ABO-secretor gene (FUT2)

FABP2 (901 words) [view diff] exact match in snippet view article find links to article

et al. (1992). "Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups". Genomics. 12 (2): 241–53. doi:10

Haplotype (2,067 words) [view diff] exact match in snippet view article find links to article

single-nucleotide polymorphisms, and the results for microsatellite short tandem repeat sequences (Y-STRs). The UEP results represent the inheritance of events

Genetic genealogy (6,185 words) [view diff] exact match in snippet view article find links to article

basis of mtDNA alone. Y-Chromosome DNA (Y-DNA) testing involves short tandem repeat (STR) and, sometimes, single nucleotide polymorphism (SNP) testing of

Rossmann fold (1,413 words) [view diff] exact match in snippet view article find links to article

structure. This pattern is duplicated once to produce an inverted tandem repeat containing six strands. Overall, the strands are arranged in the order

CatSper2 (530 words) [view diff] exact match in snippet view article find links to article

and a predicted calcium-selective pore region. This gene is part of a tandem repeat on chromosome 15q15; the second copy of this gene is thought to be a

MiR-137 (2,115 words) [view diff] exact match in snippet view article find links to article

microRNA-137 can be altered by presence of a 15-bp variable nucleotide tandem repeat in the primary miRNA transcript, which leads to change in folding and

Hybridization probe (1,011 words) [view diff] exact match in snippet view article find links to article

PMID 11077149. Tytgat, Olivier (2021). "STRide probes: Single-labeled short tandem repeat identification probes" (PDF). Biosensors and Bioelectronics. 180 113135

GP1BA (1,793 words) [view diff] exact match in snippet view article find links to article

leucine-57 to phenylalanine in a platelet glycoprotein Ib alpha leucine tandem repeat occurring in patients with an autosomal dominant variant of Bernard-Soulier

Structural Classification of Proteins database (2,574 words) [view diff] exact match in snippet view article find links to article

antiparallel hairpin, left-handed twist) and Type I dockerin domains (tandem repeat of two calcium-binding loop-helix motifs, distinct from the EF-hand)

Unequal crossing over (878 words) [view diff] exact match in snippet view article find links to article

When two sequences are misaligned, unequal crossing over may create a tandem repeat on one chromosome and a deletion on the other. The rate of unequal crossing

ZF2001 (1,982 words) [view diff] no match in snippet view article find links to article

et al. (August 2021). "Safety and immunogenicity of a recombinant tandem-repeat dimeric RBD-based protein subunit vaccine (ZF2001) against COVID-19

Collagen, type XV, alpha 1 (986 words) [view diff] exact match in snippet view article find links to article

chain contains a large amino-terminal non-triple helical domain with a tandem repeat structure and homology to alpha 1(XVIII) collagen". The Journal of Biological

Y Chromosome Haplotype Reference Database (2,022 words) [view diff] exact match in snippet view article find links to article

metapopulations. DNA profiling List of online databases Population genetics Short tandem repeat Single-nucleotide polymorphism Y chromosome Roewer, L.; Krawczak, M

Earth Human STR Allele Frequencies Database (398 words) [view diff] case mismatch in snippet view article find links to article

(Combined DNA Index System) loci. Population Genetics DNA profiling Short Tandem Repeat STR analysis STR multiplex system Snpstr Y-STR List of Y-STR markers

Genetic studies on Sinhalese (2,052 words) [view diff] exact match in snippet view article find links to article

"Global analysis of genetic variations in a 56-bp variable number of tandem repeat polymorphisms within the human deoxyribonuclease I gene". Legal Medicine

Paternal age effect (5,580 words) [view diff] exact match in snippet view article find links to article

Regarding the mutation of microsatellite DNA, also known as short tandem repeat (STR) DNA, a survey of over 12,000 paternity-tested families shows that

Genetic studies on Croats (9,366 words) [view diff] exact match in snippet view article find links to article

Martinović Klarić; et al. (2005). "Genetic variation at nine short tandem repeat loci among islanders of the eastern Adriatic coast of Croatia". Human

KCNJ12 (1,195 words) [view diff] exact match in snippet view article find links to article

structure, assignment to chromosome 17p11.1, and identification of a simple tandem repeat polymorphism". Genomics. 39 (1): 113–6. doi:10.1006/geno.1996.4450.

Unique-event polymorphism (522 words) [view diff] exact match in snippet view article find links to article

mtDNA. The properties of UEPs can be contrasted with those of short tandem repeat sequences (STRs), the other main type of genetic variation used in genealogical

FAM46A (511 words) [view diff] case mismatch in snippet view article find links to article

function of Fam46A is currently unknown but there is a Variable Number Tandem Repeat in the first exon of Fam46A that has been explored within various populations

Human polyomavirus 2 (2,774 words) [view diff] exact match in snippet view article find links to article

"Transcription factor Spi-B binds unique sequences present in the tandem repeat promoter/enhancer of JC virus and supports viral activity". The Journal

NPR3 (1,011 words) [view diff] exact match in snippet view article find links to article

S2CID 44524739. Aoi N, Soma M, Nakayama T, et al. (2004). "Variable number of tandem repeat of the 5'-flanking region of type-C human natriuretic peptide receptor

Somatostatin receptor 4 (1,072 words) [view diff] exact match in snippet view article find links to article

localization to human chromosomes 14, 17, and 22 and identification of simple tandem repeat polymorphisms". Genomics. 15 (2): 449–52. doi:10.1006/geno.1993.1088

Molecular evolution (3,961 words) [view diff] exact match in snippet view article find links to article

common type of mutation in humans is a change in the length of a short tandem repeat (e.g., the CAG repeats underlying various disease-associated mutations)

Sorenson Molecular Genealogy Foundation (1,288 words) [view diff] exact match in snippet view article find links to article

corresponding to specific locations on the Y chromosome. Markers have a Short tandem repeat (STR) that involve repeats of 2–5 DNA base pairs. At Sorenson labs,

Drosocin (981 words) [view diff] exact match in snippet view article find links to article

single protein gets chopped up into multiple Drosocin peptides. This tandem repeat structure is also found in the honeybee AMP apidaecin or fruit fly Baramicin

KCNJ3 (1,129 words) [view diff] exact match in snippet view article find links to article

(KCNJ3): localization to chromosome 2 and identification of a simple tandem repeat polymorphism". Genomics. 21 (1): 254–6. doi:10.1006/geno.1994.1253.

Three prime untranslated region (2,561 words) [view diff] exact match in snippet view article find links to article

causes myotonic dystrophy. Retro-transposal 3-kilobase insertion of tandem repeat sequences within the 3′-UTR of fukutin protein is linked to Fukuyama-type

Sri Lankan Moors (3,596 words) [view diff] exact match in snippet view article find links to article

According to a study published in 2021 using 16 X-chromosomal short tandem repeat markers (STRs) conducted on 838 unrelated individuals from the four

Coffea charrieriana (2,762 words) [view diff] exact match in snippet view article find links to article

from the other 59 Coffea genotypes. Further genetic analysis of long tandem repeat retrotransposons (LTR-RT), more specifically of the lineages SIRE and

List of Y-STR markers (572 words) [view diff] case mismatch in snippet view article find links to article

2012. Butler, John M. (9 January 2012). "Y-Chromosome STRs". Short Tandem Repeat DNA. NIST Standard Reference Database SRD 130. Archived from the original

Somatostatin receptor 3 (1,190 words) [view diff] exact match in snippet view article find links to article

localization to human chromosomes 14, 17, and 22 and identification of simple tandem repeat polymorphisms". Genomics. 15 (2): 449–52. doi:10.1006/geno.1993.1088

Somatostatin receptor 1 (1,215 words) [view diff] exact match in snippet view article find links to article

localization to human chromosomes 14, 17, and 22 and identification of simple tandem repeat polymorphisms". Genomics. 15 (2): 449–52. doi:10.1006/geno.1993.1088

Somatostatin receptor 5 (1,007 words) [view diff] exact match in snippet view article find links to article

localization to human chromosomes 14, 17, and 22 and identification of simple tandem repeat polymorphisms". Genomics. 15 (2): 449–52. doi:10.1006/geno.1993.1088

International Society for Forensic Genetics (1,138 words) [view diff] exact match in snippet view article find links to article

after the implementation of polymerase chain reaction (PCR) based short tandem repeat (STR) DNA testing, the society was instrumental in the standardization

Illumina dye sequencing (2,074 words) [view diff] exact match in snippet view article find links to article

read lengths around 90 bp long), it can be a struggle to resolve short tandem repeat areas. Also, if the sequence is de novo and a reference does not exist

TSPY1 (779 words) [view diff] exact match in snippet view article find links to article

microheterogeneous gene family organized as constitutive elements in DYZ5 tandem repeat units on the human Y chromosome". Genomics. 17 (3): 726–31. doi:10.1006/geno

Haplogroup G-P303 (3,731 words) [view diff] exact match in snippet view article find links to article

carry the P303 or S135 SNP Y-DNA mutation. There are also some short tandem repeat (STR) findings among G-P303 men which help in subgrouping them. Many

HAPLN1 (1,063 words) [view diff] exact match in snippet view article find links to article

AS, Dudhia J, Hardingham TE (April 1989). "Immunoglobulin fold and tandem repeat structures in proteoglycan N-terminal domains and link protein". Journal

Sanger sequencing (3,360 words) [view diff] exact match in snippet view article find links to article

single-strand conformation polymorphism (SSCP) heteroduplex analysis, and short tandem repeat (STR) analysis. Resolving DNA fragments according to differences in

Aneuploidy (3,596 words) [view diff] exact match in snippet view article find links to article

Example of Trisomy 21 detected via quantitative PCR short tandem repeat assay

International Society of Genetic Genealogy (2,249 words) [view diff] case mismatch in snippet view article find links to article

Margaret C. Kline; Amy E. Decker (2008). "Addressing Y-Chromosome Short Tandem Repeat Allele Nomenclature" (PDF). Journal of Genetic Genealogy. 4 (2): 125–148

Combined DNA Index System (2,563 words) [view diff] case mismatch in snippet view article find links to article

; Niezgoda, Stephen J.; Brown, Barry L. "CODIS and PCR-Based Short Tandem Repeat Loci: Law Enforcement Tools" (PDF). Promega. Retrieved October 8, 2016

HIP1R (676 words) [view diff] exact match in snippet view article find links to article

N, Shink E, Harvey M, et al. (2005). "Analysis of a variable number tandem repeat polymorphism in the huntingtin interacting protein-1 related gene for

Diagnostic microbiology (4,637 words) [view diff] case mismatch in snippet view article find links to article

Martine (2018-08-03). "Multiple-Locus Variable Number Tandem Repeat Analysis (MLVA) and Tandem Repeat Sequence Typing (TRST), helpful tools for subtyping

HOXB1 (1,092 words) [view diff] exact match in snippet view article find links to article

genetic polymorphism in the human HOXB1 homeobox gene implying a 9bp tandem repeat in the amino-terminal coding region. Mutations in brief no. 200. Online"

P-selectin glycoprotein ligand-1 (2,768 words) [view diff] exact match in snippet view article find links to article

complements other GalNAc-transferases in complete O-glycosylation of the MUC1 tandem repeat". The Journal of Biological Chemistry. 273 (46): 30472–30481. doi:10

ATBF1 (844 words) [view diff] exact match in snippet view article find links to article

A, de Belleroche J (2000). "Characterization of trinucleotide- and tandem repeat-containing transcripts obtained from human spinal cord cDNA library

NFE2 (1,097 words) [view diff] exact match in snippet view article find links to article

P (2003). "Cloning MafF by recognition site screening with the NFE2 tandem repeat of HS2: analysis of its role in globin and GCSl genes regulation". Blood

Hyalin (1,407 words) [view diff] exact match in snippet view article find links to article

recombinant hyalin and blocked its adhesion similar to normal hyalin. The tandem repeat region was then found to be on the filamentous part of hyalin when the

ST6GALNAC1 (720 words) [view diff] case mismatch in snippet view article find links to article

(November 2019). "Products of Chemoenzymatic Synthesis Representing MUC1 Tandem Repeat Unit with T-, ST- or STn-antigen Revealed Distinct Specificities of

Buffy fish owl (2,006 words) [view diff] no match in snippet view article find links to article

H.; Masuda, R. (2013). "Limited phylogenetic distribution of a long tandem-repeat cluster in the mitochondrial control region in Bubo (Aves, Strigidae)

Tawny fish owl (2,099 words) [view diff] no match in snippet view article find links to article

H.; Masuda, R. (2013). "Limited phylogenetic distribution of a long tandem-repeat cluster in the mitochondrial control region in Bubo (Aves, Strigidae)

Germline mutation (3,113 words) [view diff] exact match in snippet view article find links to article

12 and 13 (also called the Repeat Variable Diresidue (RVD)) of this tandem repeat, with some RVDs showing a higher specificity for specific amino acids

Germline mutation (3,113 words) [view diff] exact match in snippet view article find links to article

12 and 13 (also called the Repeat Variable Diresidue (RVD)) of this tandem repeat, with some RVDs showing a higher specificity for specific amino acids

Clostridioides difficile infection (10,544 words) [view diff] no match in snippet view article find links to article

differentiated using whole-genome sequencing or multilocus variable-number tandem-repeat analysis. Several treatment options exist for recurrent C. difficile

Cystathionine beta synthase (3,186 words) [view diff] exact match in snippet view article find links to article

protozoan CBS. At the C-terminus, the regulatory domain of CBS contains a tandem repeat of two CBS domains of β-α-β-β-α, a secondary structure motif found in

Genetic history of Egypt (11,075 words) [view diff] exact match in snippet view article find links to article

affiliation to a major population group based on 17 autosomal short tandem repeat genotype profile". International Journal of Legal Medicine. 125 (5):

Marker-assisted selection (2,928 words) [view diff] exact match in snippet view article find links to article

another gene or a polymorphism that is easier to detect, such as a short tandem repeat) may present as the most realistic option. There are several indications

Trefoil factor 2 (1,041 words) [view diff] exact match in snippet view article find links to article

Kayademir T, Silva Edos S, Pusch C, et al. (1998). "A novel 25 bp tandem repeat within the human trefoil peptide gene TFF2 in 21q22.3: polymorphism

MAFF (gene) (1,840 words) [view diff] exact match in snippet view article

P (2003). "Cloning MafF by recognition site screening with the NFE2 tandem repeat of HS2: analysis of its role in globin and GCSl genes regulation". Blood

Genetic studies on Bosniaks (3,068 words) [view diff] exact match in snippet view article find links to article

population study at fifteen autosomal and twelve Y-chromosome short tandem repeat loci in the representative sample of multinational Bosnia and Herzegovina

Haplogroup G-FGC7535 (1,487 words) [view diff] exact match in snippet view article find links to article

testing for L293. Almost all G2a1 persons have a value of 10 at short tandem repeat (STR) marker DYS392. The major G2a1 subgroup typically has higher values

Paul Keim (1,362 words) [view diff] exact match in snippet view article find links to article

Francisella tularensis isolates determined by multiple-locus variable-number tandem repeat analysis". Journal of Bacteriology. 186 (17): 5808–5818. doi:10.1128/JB

FF domain (313 words) [view diff] exact match in snippet view article find links to article

found in FBP11, CA150, and PRP40 Crystal structure of the TCERG1 FF4-6 tandem repeat domain Identifiers Symbol FF Pfam PF01846 InterPro IPR002713 Available

Ichthyophthirius multifiliis (2,688 words) [view diff] exact match in snippet view article find links to article

Clark, Theodore G. (2002-03-01). "Variation in primary sequence and tandem repeat copy number among i-antigens of Ichthyophthirius multifiliis". Molecular

TPSAB1 (1,083 words) [view diff] exact match in snippet view article find links to article

distinct features. They have a highly conserved 3' UTR and contain tandem repeat sequences at the 5' flank and 3' UTR which are thought to play a role

Bacillus anthracis (4,733 words) [view diff] exact match in snippet view article find links to article

and relatedness. These methods include multiple-locus variable-number tandem repeat analysis (MLVA) and typing systems using canonical single-nucleotide

Doublecortin (1,916 words) [view diff] exact match in snippet view article find links to article

Doublecortin and Doublecortin-like proteins allowed the identification of a tandem repeat of evolutionarily conserved Doublecortin (DC) domains. These domains

District Attorney's Office v. Osborne (1,014 words) [view diff] case mismatch in snippet view article find links to article

DNA evidence against him be tested at his personal expense by Short Tandem Repeat (STR) analysis, a method more discriminating than both RFLP and DQ Alpha

Bacillus licheniformis (1,921 words) [view diff] exact match in snippet view article find links to article

isolates by high resolution melt analysis of multiple variable number tandem repeat loci". Food Microbiology. 34 (2): 344–351. doi:10.1016/j.fm.2013.01

AMELX (1,175 words) [view diff] exact match in snippet view article find links to article

transplantation using multiplex polymerase chain reaction amplification of short tandem repeat markers and Amelogenin". Neoplasma. 54 (5): 424–30. PMID 17688372. Tarasevich

Mild androgen insensitivity syndrome (3,924 words) [view diff] exact match in snippet view article find links to article

(February 1992). "Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups". Genomics. 12 (2): 241–53. doi:10

YWHAQ (1,999 words) [view diff] exact match in snippet view article find links to article

with amyotrophic lateral sclerosis. It contains in its 5' UTR a 6 bp tandem repeat sequence that is polymorphic; however, there is no correlation between

Archaeogenetics (5,856 words) [view diff] exact match in snippet view article find links to article

coupled with “low diversity of lineage-associated Y-chromosomal short tandem repeat (Y-STR) haplotypes” provide evidence for a “recent founder or bottleneck”

Han Taiwanese (4,289 words) [view diff] exact match in snippet view article find links to article

the father. Population analyses of Han Taiwanese based on the short tandem repeat sequences on the Y chromosome, which is specific to males, shows high

CGGBP1 (877 words) [view diff] exact match in snippet view article find links to article

proteins from human HeLa cells that bind specifically to the unstable tandem repeat (CGG)n in the human FMR1 gene". J. Biol. Chem. 271 (8): 4327–34. doi:10

Single-nucleotide polymorphism (7,063 words) [view diff] exact match in snippet view article find links to article

structure. Affymetrix HapMap Illumina International HapMap Project Short tandem repeat (STR) Single-base extension SNP array SNP genotyping SNPedia Snpstr

Squalene-hopene cyclase (1,430 words) [view diff] exact match in snippet view article find links to article

structural integrity, some scientists believe that the enzyme’s 7-8 non-tandem repeat QW motifs (Q is glutamine and W is tryptophan) that connect numerous

Brown fish owl (3,625 words) [view diff] no match in snippet view article find links to article

H.; Masuda, R. (2013). "Limited phylogenetic distribution of a long tandem-repeat cluster in the mitochondrial control region in Bubo (Aves, Strigidae)

Glutaminase deficiency (297 words) [view diff] exact match in snippet view article find links to article

Waterham HR, Usdin K, van Karnebeek CDM (2019) glutaminase deficiency caused by short tandem repeat expansion in GLS. N Engl J Med 380(15):1433-1441

Dopamine receptor D4 (4,114 words) [view diff] exact match in snippet view article find links to article

personality trait of novelty seeking. The 48-base pair variable number tandem repeat (VNTR) in exon 3 range from 2 to 11 repeats. Dopamine is more potent

Caenorhabditis nigoni (1,232 words) [view diff] case mismatch in snippet view article find links to article

PMID 29302007. Subirana, Juan A.; Messeguer, Xavier (2017-11-28). "Evolution of Tandem Repeat Satellite Sequences in Two Closely Related Caenorhabditis Species. Diminution

Human genetic clustering (2,801 words) [view diff] exact match in snippet view article find links to article

genetic studies using genetic markers such as Alu sequences, short tandem repeat polymorphisms, and single nucleotide polymorphisms (SNPs), among others

Interleukin 15 receptor, alpha subunit (1,235 words) [view diff] exact match in snippet view article find links to article

and to mouse chromosome 6 close to the Raf-1 locus with polymorphic tandem repeat sequences". Mamm. Genome. 4 (8): 435–9. doi:10.1007/BF00296817. PMID 8104057

Genetic studies on Turkish people (5,108 words) [view diff] exact match in snippet view article find links to article

contribution to current Anatolian Y-chromosome loci (one binary and six short tandem repeat) and mitochondrial DNA gene pool to be roughly 30%. A 2004 high-resolution

Glucagon-like peptide-1 receptor (4,105 words) [view diff] exact match in snippet view article find links to article

fluorescence in situ hybridization and linkage of a highly polymorphic simple tandem repeat DNA polymorphism to other markers on chromosome 6". Diabetes. 42 (8):

Y chromosome (7,995 words) [view diff] case mismatch in snippet view article find links to article

Muller's ratchet Single nucleotide polymorphism Y chromosome Short Tandem Repeat (STR) Y linkage Y-chromosomal Aaron Y-chromosomal Adam Y-chromosome

Somatostatin receptor 2 (4,036 words) [view diff] exact match in snippet view article find links to article

localization to human chromosomes 14, 17, and 22 and identification of simple tandem repeat polymorphisms". Genomics. 15 (2): 449–52. doi:10.1006/geno.1993.1088

Erika Hagelberg (2,445 words) [view diff] exact match in snippet view article find links to article

out of a stone, just about'. Jeffreys and Hagelberg worked on single tandem repeat typing. Her early work included the analysis of bones from the Mary

Protecting group (6,754 words) [view diff] case mismatch in snippet view article find links to article

tumorassoziierten Sialyl-Tn-Antigen-Glycopeptids mit einer Partialsequenz aus dem "Tandem Repeat" des MUC-1-Mucins In: Angew. Chem. volume 109, 1997, pp. 629–631 (in

Madia Gond (2,878 words) [view diff] exact match in snippet view article find links to article

congruence between language and gene pool. Allele frequency data at 15 Short tandem repeat (STR) loci in studied tribes was compared with data of 22 Indo-European-

Tutankhamun (13,860 words) [view diff] exact match in snippet view article find links to article

maint: article number as page number (link) "Analysis of the short tandem repeat (STR) data published on Ramesses III and the Amarna ancient royal family

Cannabis (10,397 words) [view diff] exact match in snippet view article find links to article

March 2022. Gilmore S, Peakall R, Robertson J (January 2003). "Short tandem repeat (STR) DNA markers are hypervariable and informative in Cannabis sativa:

Indigenous peoples in Canada (13,617 words) [view diff] case mismatch in snippet view article find links to article

Cecil M. (February 2010). "Hierarchical modeling of genome-wide Short Tandem Repeat (STR) markers infers native American prehistory". American Journal of

Belahi (cattle) (472 words) [view diff] no match in snippet view article

of rare migratory cattle and evaluation of its phylogeny using short-tandem-repeat-based markers". Journal of Applied Animal Research. 45 (1): 355–363

Harvey v. Horan (2,142 words) [view diff] exact match in snippet view article find links to article

case. The Innocence Project wanted to re-test the evidence using short tandem repeat ("STR") DNA testing, which was unavailable at the time of Harvey's trial

FamilyTreeDNA (5,823 words) [view diff] exact match in snippet view article find links to article

Genetic genealogy Human mitochondrial genetics Phylogenetic tree Short tandem repeat Single-nucleotide polymorphism Test types DNA microarray DNA sequencing

Genealogical DNA test (8,387 words) [view diff] exact match in snippet view article find links to article

two types of DNA testing: STRs and SNPs. Most common is STRs (short tandem repeat). A certain section of DNA is examined for a pattern that repeats (e

Cell culture (8,627 words) [view diff] exact match in snippet view article find links to article

repositories are now authenticating all cell line submissions. ATCC uses short tandem repeat (STR) DNA fingerprinting to authenticate its cell lines. To address

Type 1 diabetes (14,377 words) [view diff] exact match in snippet view article find links to article

earliest identified non-HLA genes linked to T1D. A variable number tandem repeat (VNTR) polymorphism in the promoter region of the insulin gene affects

Arachidonate 5-lipoxygenase (7,587 words) [view diff] exact match in snippet view article find links to article

Spanish patients. Bearers of two variations in the predominant five tandem repeat Sp1 binding motif (GGGCCGG) of the ALOX5 gene promoter in 470 subjects

Haplogroup T-M184 (20,106 words) [view diff] exact match in snippet view article find links to article

PMID 26173964. Calcagno G, Labruna G, Sacchetti L (2005). "Y-chromosome short tandem repeat (STR) haplotypes in a Campania population sample". Clinical Chemistry

TMCO6 (1,249 words) [view diff] exact match in snippet view article find links to article

Armadillo/ beta-catenin-like-repeat, is about a 40 amino acid long tandem repeat that forms superhelix of helices. Another feature is that TMCO6 has

Forensic biology (6,037 words) [view diff] case mismatch in snippet view article find links to article

Davidson, Esewi (July 2020). "Forensic DNA Profiling: Autosomal Short Tandem Repeat as a Prominent Marker in Crime Investigation". The Malaysian Journal

Reverse complement polymerase chain reaction (1,544 words) [view diff] case mismatch in snippet view article find links to article

human forensics applications under the trademark IDseek®. The Short Tandem Repeat version of the kit is validated by the Netherlands Forensic Institute

CDV3 (gene) (932 words) [view diff] exact match in snippet view article

[134-137] MEKS [213-216] MEKS ______________________________ Simple tandem repeat: [31-43] AAGAA_GSAGGSSG [44-54] AAGAAGGGAGA PROSITE found several

Protein engineering (7,428 words) [view diff] exact match in snippet view article find links to article

gene length via insertion and deletion mutations. An example is the tandem repeat insertion (TRINS) method. This technique results in the generation of

Bacterial blight of cassava (1,920 words) [view diff] exact match in snippet view article find links to article

is acquired by a two-residues combination (12 and 13 mer) in every tandem repeat that composes the central region; a change in a residue will result

Comparative genomics (8,080 words) [view diff] exact match in snippet view article find links to article

to identify large rearrangements, single base mutations, reversals, tandem repeat expansions and other polymorphisms. In bacteria, MUMMER enables the

Haplogroup R-M269 (6,688 words) [view diff] exact match in snippet view article find links to article

Cavalli-Sforza LL, Woodward SR, Underhill PA (August 2007). "Y-chromosome short tandem repeat DYS458.2 non-consensus alleles occur independently in both binary haplogroups

Androgen insensitivity syndrome (12,604 words) [view diff] exact match in snippet view article find links to article

(February 1992). "Genetic variation at five trimeric and tetrameric tandem repeat loci in four human population groups". Genomics. 12 (2): 241–53. doi:10

Genetic history of the British Isles (9,874 words) [view diff] exact match in snippet view article find links to article

rare in Europe but phylogenetic network analysis of its Y-STR (short tandem repeat) haplotype shows that it is most closely related to an Egyptian T haplotype

List of haplogroups of historic people (7,005 words) [view diff] exact match in snippet view article find links to article

Francis. pp. 209–212. ISBN 978-1-000-88066-3. "Analysis of the short tandem repeat (STR) data published on Ramesses III and the Amarna ancient royal family

Paternity Index (1,131 words) [view diff] exact match in snippet view article find links to article

V; Stevens, P; Ayres, KL; Debenham, PG (1999). "Validation of short tandem repeat analysis for the investigation of cases of disputed paternity". Forensic

DNA database (7,289 words) [view diff] case mismatch in snippet view article find links to article

2012-06-17. Retrieved 2012-08-04. Gill, P. (February 2002). "Role of Short Tandem Repeat DNA in Forensic Casework in the UK—Past, Present, and Future Perspectives"

Great horned owl (22,322 words) [view diff] no match in snippet view article find links to article

H.; Masuda, R. (2013). "Limited phylogenetic distribution of a long tandem-repeat cluster in the mitochondrial control region in Bubo (Aves, Strigidae)

Cell-free fetal DNA (5,960 words) [view diff] exact match in snippet view article find links to article

reaction (PCR). sex-determining region Y gene (SRY) and Y chromosome short tandem repeat "DYS14" in cffDNA from 511 pregnancies were analyzed using quantitative

Ueli Schibler (2,245 words) [view diff] case mismatch in snippet view article find links to article

in University of Geneva have developed a technique called "Synthetic Tandem Repeat PROMoter (STAR-PROM) screening" which can assist identify transcription

Genetic history of the Middle East (11,995 words) [view diff] exact match in snippet view article find links to article

affiliation to a major population group based on 17 autosomal short tandem repeat genotype profile". International Journal of Legal Medicine. 125 (5):

Armenis (family) (2,987 words) [view diff] exact match in snippet view article

terminal SNP for this branch of R1b-L2 is FGC13631 and the 12-marker short tandem repeat values for this SNP are as follows: 13, 24, 14, 11, 11-14/15, 12, 12

Haplogroup R1a (13,576 words) [view diff] exact match in snippet view article find links to article

tribe. This finding, together with the higher R1a-associated short tandem repeat diversity in India and Iran compared with Europe and central Asia, suggests

ZNF821 (1,231 words) [view diff] exact match in snippet view article find links to article

Myoba S, Yokoyama T, et al. (September 2010). "STPR, a 23-amino acid tandem repeat domain, found in the human function-unknown protein ZNF821". Biochemistry

List of acronyms: S (5,414 words) [view diff] case mismatch in snippet view article find links to article

3166 trigram) (i) Standard Temperature and Pressure STR – (i) Short Tandem Repeat (DNA analysis) STRATCOM – (p) United States Strategic Command STRICOM

Haplogroup N-M231 (12,838 words) [view diff] exact match in snippet view article find links to article

Park; BW Chun (2018). "Genetic characteristics of Y-chromosome short tandem repeat haplotypes from cigarette butt samples presumed to be smoked by North

RAD9A (3,997 words) [view diff] exact match in snippet view article find links to article

homolog, RAD17, and TOPBP1. The Rad9 protein contains a carboxy-terminal tandem repeat of the BRCT (BRCA1 carboxyl terminus) motif, which is found in many

Haplogroup G-M406 (4,142 words) [view diff] exact match in snippet view article find links to article

area. A large number of G-M406 persons have the value of 21 at short tandem repeat (STR) marker DYS390, and all G-M406 men will have the M406 SNP mutation

2022–2023 mpox outbreak (20,398 words) [view diff] exact match in snippet view article find links to article

been reported in the natural transmission of monkeypox virus. Using Tandem repeat polymorphism, case FVGITA-01 (ON755039) in Italy, case VIDRL01(ON631963)

Mutation bias (3,379 words) [view diff] exact match in snippet view article find links to article

differences in codon usage or genome composition between species. The short tandem repeat (STR) loci used in forensic identification may show biased patterns

Forensic entomology and the law (5,479 words) [view diff] exact match in snippet view article find links to article

sequencing methods currently utilized by forensic labs include STR or short tandem repeat profiling and HVR or the hypervariable regions of DNA. The current DNA

Jian-Kang Zhu (2,374 words) [view diff] exact match in snippet view article find links to article

for the model plant Arabidopsis. They have also developed an elegant tandem repeat-HDR (homology-directed repair) approach for efficient sequence insertion

C13orf46 (2,180 words) [view diff] exact match in snippet view article find links to article

22 different isoforms. Mucins are highly O-glycosylated and contain tandem repeat domains abundant with proline, serine, and threonine. Surrounding the

Glossary of cellular and molecular biology (0–L) (33,351 words) [view diff] exact match in snippet view article

which the repeats are immediately adjacent to each other is known as a tandem repeat. directionality The end-to-end chemical orientation of a single linear

Haplogroup O-M122 (10,798 words) [view diff] exact match in snippet view article find links to article

Chun, BW (Aug 2018). "Genetic characteristics of Y-chromosome short tandem repeat haplotypes from cigarette butt samples presumed to be smoked by North

Wildlife forensic science (4,160 words) [view diff] case mismatch in snippet view article find links to article

(2020-09-24). "Development and Validation of a Novel Five-Dye Short Tandem Repeat Panel for Forensic Identification of 11 Species". Frontiers in Genetics

Nuclear mitochondrial DNA segment (6,868 words) [view diff] case mismatch in snippet view article find links to article

Domestic Cat (Felis Catus) Mitochondrial Genome and a Transposed MtDNA Tandem Repeat (Numt) in the Nuclear Genome". Genomics. 33 (2): 229–46. doi:10.1006/geno

Telomeric repeat–containing RNA (5,239 words) [view diff] exact match in snippet view article find links to article

Telomerase is the ribonucleoprotein responsible for adding species-dependent tandem repeat sequences (TTAGGG in humans) to the ends of telomeres. These telomeric

Haplogroup T-L206 (6,221 words) [view diff] exact match in snippet view article find links to article

Thomas Jefferson Phylogenetic network analysis of its Y-STR (short tandem repeat) haplotype shows that it is most closely related to an Egyptian K2 [now

Cordon-bleu protein (2,694 words) [view diff] exact match in snippet view article find links to article

domain is found as a modular part of larger proteins and can occur as a tandem repeat. The WH2 domain binds actin monomers and can facilitate the assembly

List of public inquiry recommendations in the United Kingdom (1,001 words) [view diff] case mismatch in snippet view article find links to article

E.coli O157 outbreak in South Wales PDF 19/03/2009 "Variable Number Tandem Repeat (VNTR) should be validated as a standard method for the typing of E