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Longer titles found: Compressed suffix array (view), Generalized suffix array (view)

searching for Suffix array 7 found (47 total)

Range minimum query (1,588 words) [view diff] exact match in snippet view article find links to article

indexes i and j in T. To do this we first compute the suffix array A, and the inverse suffix array A−1. We then compute the LCP array H giving the LCP of

List of Jewish American computer scientists (1,638 words) [view diff] exact match in snippet view article find links to article

(2008) Udi Manber, Israeli-American computer scientist; agrep, GLIMPSE, suffix array, search engines John McCarthy, artificial intelligence, LISP programming

MUMmer (819 words) [view diff] exact match in snippet view article find links to article

Query parallelism. “MUMmer4 now includes options to save and load the suffix array for a given reference." This allows the suffix tree can be built once

Carrot2 (603 words) [view diff] case mismatch in snippet view article find links to article

Discontinued projects: jSuffixArrays: Several Java implementations of the Suffix Array data structure with different performance and memory characteristics

Cartesian tree (4,294 words) [view diff] case mismatch in snippet view article find links to article

Succinct Representation of RMQ-Information and Improvements in the Enhanced Suffix Array.", Proceedings of the International Symposium on Combinatorics, Algorithms

General-purpose computing on graphics processing units (7,033 words) [view diff] exact match in snippet view article find links to article

K20X Yes Available now UGENE Opensource Smith–Waterman for SSE/CUDA, suffix array based repeats finder and dotplot Fast short read alignment 6–8x T 2075

List of sequence alignment software (2,358 words) [view diff] exact match in snippet view article find links to article

from B. Pearson) 2002 UGENE Opensource Smith-Waterman for SSE/CUDA, Suffix array based repeats finder & dotplot Both Both UniPro 2010 water Smith-Waterman