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searching for Ribbon diagram 57 found (99 total)

alternate case: ribbon diagram

Flavodoxin fold (54 words) [view diff] exact match in snippet view article find links to article

Ribbon diagram of CheY (a regulator of the chemotactic response in bacteria, PDB accession code 3CHY), which adopts the flavodoxin fold. Ribbon is colored
Ferredoxin fold (81 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of acylphosphatase (PDB accession code 2ACY), which adopts a ferredoxin fold with an extra β-strand at the C-terminus (shown in red). The
PETase (987 words) [view diff] exact match in snippet view article find links to article
MHET, and has an additional methanol esterified to it. PDBID: 5XH3. Ribbon diagram of PETase with three residues Ser160, Asp206, and His237. The catalytic
Chloramphenicol acetyltransferase (408 words) [view diff] exact match in snippet view article find links to article
Chloramphenicol acetyltransferase Ribbon diagram of the chloramphenicol acetyltransferase trimer with chloramphenicol bound. From PDB: 3CLA​. Identifiers
Cytochrome b5 reductase (170 words) [view diff] exact match in snippet view article find links to article
cytochrome-b5 reductase Ribbon diagram of erythrocytic methemoglobin reductase with FAD bound. From PDB: 1UMK​. Identifiers EC no. 1.6.2.2 CAS no. 9032-25-1
Glia maturation factor (106 words) [view diff] exact match in snippet view article find links to article
Stereo ribbon diagram of the crystal structure of GMFG. Spectral coloring is from blue (N-terminus) to red (C-terminus). Secondary structural elements
Cyclophilin (869 words) [view diff] exact match in snippet view article find links to article
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD Ribbon diagram of cyclophilin A in complex with ciclosporin (yellow). From PDB: 1CWA​. Identifiers
Monoamine oxidase (2,959 words) [view diff] exact match in snippet view article find links to article
monoamine oxidase A Ribbon diagram of a monomer of human MAO-A, with FAD and clorgiline bound, oriented as if attached to the outer membrane of a mitochondrion
Methylmalonyl CoA epimerase (683 words) [view diff] exact match in snippet view article find links to article
methylmalonyl CoA epimerase Ribbon diagram of methylmalonyl-CoA epimerase from Propionibacterium shermanii. From PDB: 1JC5​. Identifiers EC no. 5.1.99
COPII (909 words) [view diff] exact match in snippet view article find links to article
Sec23 homolog A Ribbon diagram of the crystallographic structure of the COPII heterodimer of Sec23 and Sec24. Alpha helices are in red and the beta sheets
Antiviral protein (503 words) [view diff] exact match in snippet view article find links to article
recognition of specific target RNA, and the process by which ZAP coordinates downstream RNA degradation (right). ZAP-RNA complex protein ribbon diagram (left).
SH3 domain (915 words) [view diff] exact match in snippet view article find links to article
SH3 domain Ribbon diagram of the SH3 domain, alpha spectrin, from chicken (PDB accession code 1SHG), colored from blue (N-terminus) to red (C-terminus)
Ankyrin (967 words) [view diff] exact match in snippet view article find links to article
ANK1, erythrocytic Ribbon diagram of a fragment of the membrane-binding domain of ankyrin R. Identifiers Symbol ANK1 Alt. symbols AnkyrinR, Band2.1 NCBI
Tyrosine aminotransferase (959 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of the tyrosine aminotransferase dimer. The prosthetic group PLP is visible in both monomers.
NAD+ kinase (1,447 words) [view diff] exact match in snippet view article find links to article
NAD+ kinase Ribbon diagram of NAD+ kinase in complex with substrates. Identifiers EC no. 2.7.1.23 CAS no. 9032-66-0 Databases IntEnz IntEnz view BRENDA
Isopenicillin N synthase (916 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of isopenicillin N Synthase. Active site iron is visible at center in gray. From PDB 1BK0
WD40 repeat (956 words) [view diff] exact match in snippet view article find links to article
WD domain, G-beta repeat Ribbon diagram of the C-terminal WD40 domain of Tup1 (a transcriptional corepressor in yeast), which adopts a 7-bladed beta-propeller
Arginase (1,255 words) [view diff] exact match in snippet view article find links to article
Arginase Ribbon diagram of human arginase I trimer. PDB entry 2pha Identifiers EC no. 3.5.3.1 CAS no. 9000-96-8 Databases IntEnz IntEnz view BRENDA BRENDA
Canakinumab (1,174 words) [view diff] exact match in snippet view article find links to article
Canakinumab Ribbon diagram of canakinumab (blue) bound to IL-1β (yellow) from PDB entry 5bvp Monoclonal antibody Type Whole antibody Source Human Target
Electron-transferring-flavoprotein dehydrogenase (1,309 words) [view diff] exact match in snippet view article find links to article
Electron-transferring-flavoprotein dehydrogenase Ribbon diagram of electron-transferring-flavoprotein dehydrogenase with each functional domain differentially
Bromodomain (1,163 words) [view diff] exact match in snippet view article find links to article
Bromodomain Ribbon diagram of the GCN5 bromodomain from Saccharomyces cerevisiae, colored from blue (N-terminus) to red (C-terminus). Identifiers Symbol
Aequorea victoria (1,439 words) [view diff] exact match in snippet view article find links to article
Green fluorescent protein ribbon diagram
Thaumatin (1,256 words) [view diff] exact match in snippet view article find links to article
Thaumatin family Ribbon diagram of thaumatin I. From PDB: 1RQW​. Identifiers Symbol Thaumatin Pfam PF00314 InterPro IPR001938 SMART SM00205 PROSITE PDOC00286
Aromatic L-amino acid decarboxylase (1,930 words) [view diff] exact match in snippet view article find links to article
Aromatic L amino acid decarboxylase (DOPA decarboxylase) Ribbon diagram of a DOPA decarboxylase dimer. Identifiers EC no. 4.1.1.28 CAS no. 9042-64-2 Databases
MHETase (369 words) [view diff] exact match in snippet view article find links to article
MHETase MHETase ribbon diagram (PDB: 6QGA​). The hydrolase domain is shown in brown including the catalytic rsidues in magenta. The lid domain is shown
Beta-propeller (1,988 words) [view diff] exact match in snippet view article find links to article
WD domain, G-beta repeat Ribbon diagram of the C-terminal WD40 domain of Tup1 (a transcriptional co-repressor in yeast), which adopts a 7-bladed beta-propeller
Sucrose synthase (505 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of Sucrose Synthase-1 3S27 Structure, isolated from Arabidopsis thaliana.
Carbonyl reductase (NADPH) (286 words) [view diff] exact match in snippet view article
Ribbon diagram of human carbonyl reductase 1, in complex with NADPH and a small molecule inhibitor (not shown). From PDB: 1WMA​.
Beta-galactosidase (3,082 words) [view diff] exact match in snippet view article find links to article
The image on the left is a ribbon diagram of beta-galactosidase displaying the location of Glu 461, Glu 537, and Gly 794. The image on the right is a zoomed
ZC3HAV1 (592 words) [view diff] exact match in snippet view article find links to article
recognition of specific target RNA, and the process by which ZAP coordinates downstream RNA degradation (right). ZAP-RNA complex protein ribbon diagram (left).
Cobatoxin (469 words) [view diff] exact match in snippet view article find links to article
Cobatoxin 1 Space-filling diagram of cobatoxin 1 Ribbon diagram of cobatoxin 1 Identifiers CAS Number 211688-17-4 ChemSpider none Properties Chemical formula
Ankyrin repeat (1,392 words) [view diff] exact match in snippet view article find links to article
Ankyrin repeat domain Ribbon diagram of a fragment of the membrane-binding domain of ankyrin R. Identifiers Symbol Ank Pfam PF00023 InterPro IPR002110
Streptavidin (2,497 words) [view diff] exact match in snippet view article find links to article
Streptavidin Monomeric streptavidin (ribbon diagram) with bound biotin (spheres); PDB: 1STP​ Identifiers Organism Streptomyces avidinii Symbol ? UniProt
Methyl-accepting chemotaxis proteins (873 words) [view diff] exact match in snippet view article find links to article
Methyl-accepting chemotaxis proteins Ribbon diagram of the S. typhimurium aspartate receptor ligand binding domain Identifiers Symbol Methyl-accepting
EPSP synthase (1,310 words) [view diff] exact match in snippet view article find links to article
EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) Ribbon diagram of EPSP synthase Identifiers Symbol EPSP_synthase Pfam PF00275 InterPro IPR001986
Cobratoxin (2,286 words) [view diff] exact match in snippet view article find links to article
Cobratoxin Ribbon diagram Space filling diagram Identifiers CAS Number 769933-79-1 Y 3D model (JSmol) Interactive image ChemSpider none PubChem CID 91898464
Flavin-containing monooxygenase (3,759 words) [view diff] exact match in snippet view article find links to article
Flavin-containing monooxygenase Ribbon diagram of yeast FMO (PDB: 1VQW). Identifiers EC no. 1.14.13.8 CAS no. 37256-73-8 Databases IntEnz IntEnz view BRENDA
Dimethylargininase (1,111 words) [view diff] exact match in snippet view article find links to article
dimethylargininase Ribbon diagram of human DDAH1. Identifiers EC no. 3.5.3.18 CAS no. 123644-75-7 Databases IntEnz IntEnz view BRENDA BRENDA entry ExPASy
Transferase (6,217 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of a variant structure of estrogen sulfotransferase (PDB 1aqy EBI)
Aequorin (3,103 words) [view diff] exact match in snippet view article find links to article
Aequorin 1 Aequorin ribbon diagram from PDB 1ej3 with prosthetic group coelenterazine in blue Identifiers Organism Aequorea victoria (Jellyfish) Symbol
Alkaline phosphatase (5,859 words) [view diff] exact match in snippet view article find links to article
Alkaline phosphatase Ribbon diagram (rainbow-color, N-terminus = blue, C-terminus = red) of the dimeric structure of bacterial alkaline phosphatase. Identifiers
Anthrax toxin (3,522 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of a PA63 heptamer forming a pre-pore.
Enzyme inhibitor (7,788 words) [view diff] no match in snippet view article find links to article
transpeptidase from the bacteria Streptomyces R61 (the protein is shown as a ribbon-diagram). Antibiotic drug design is facilitated when an enzyme that is essential
Cyclomaltodextrin glucanotransferase (697 words) [view diff] exact match in snippet view article find links to article
cyclomaltodextrin glucanotransferase CGTase ribbon diagram Identifiers EC no. 2.4.1.19 CAS no. 9030-09-5 Databases IntEnz IntEnz view BRENDA BRENDA entry
Chorismate synthase (1,158 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of the 1ZTB structure, Chorismate synthase isolated from Mycobacterium tuberculosis.
Neurexin (2,171 words) [view diff] exact match in snippet view article find links to article
neurexin 1 3D ribbon diagram of alpha-neurexin 1 Identifiers Symbol NRXN1 NCBI gene 9378 HGNC 8008 OMIM 600565 RefSeq NM_001135659.1 UniProt Q9ULB1 Other
AP endonuclease (1,443 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of APE1. PDB = 1de9.
Botulinum toxin (9,269 words) [view diff] exact match in snippet view article find links to article
Botulinum toxin A Ribbon diagram of tertiary structure of BotA (P0DPI1). PDB entry 3BTA. Clinical data Trade names Botox, Myobloc, Jeuveau, others AHFS/Drugs
Bovine pancreatic ribonuclease (1,448 words) [view diff] exact match in snippet view article find links to article
Labeled ribbon diagram dalla ribonuclease A pancreatica bovina (PDB accession code 7RSA). The backbone ribbon is colored from blue (N-terminus) to red
RuBisCO (6,235 words) [view diff] exact match in snippet view article find links to article
ISBN 978-0-7167-3051-4. Figure 20.3. Structure of Rubisco. (Color-coded ribbon diagram) The structure of RuBisCO from the photosynthetic bacterium Rhodospirillum
Green fluorescent protein (7,117 words) [view diff] exact match in snippet view article find links to article
the side of the beta barrel cut away to reveal the chromophore (highlighted as ball-and-stick). From PDB: 1GFL​. GFP ribbon diagram. From PDB: 1EMA​.
Influenza A virus subtype H5N1 (8,855 words) [view diff] exact match in snippet view article find links to article
The N in H5N1 stands for "Neuraminidase", the protein depicted in this ribbon diagram
MTOR inhibitors (6,147 words) [view diff] exact match in snippet view article find links to article
Ribbon diagram of human FKBP12 in complex with rapamycin interacting with the rapamycin domain of mTOR
Anabolic steroid (18,713 words) [view diff] exact match in snippet view article find links to article
The human androgen receptor bound to testosterone The protein is shown as a ribbon diagram in red, green, and blue, with the steroid shown in white.
Adeno-associated virus (8,197 words) [view diff] exact match in snippet view article find links to article
AAV2 capsid, shown as a ribbon diagram, with the back half hidden for clarity. One fivefold symmetry axis is shown center.
Picornain 3C (2,399 words) [view diff] exact match in snippet view article find links to article
Picornain 3C Ribbon diagram of picornain, PDB entry 5fx6 Identifiers EC no. 3.4.22.28 CAS no. 97162-88-4 Databases IntEnz IntEnz view BRENDA BRENDA entry
List of Duke University people (20,889 words) [view diff] exact match in snippet view article find links to article
Richardson, professor of biochemistry; developed the Richardson diagram, or ribbon diagram, method of representing the 3D structure of proteins, MacArthur Fellow