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searching for Matrix similarity 26 found (45 total)

Matrix equivalence (595 words) [view diff] exact match in snippet view article find links to article

representative matrices above are the simplest matrix for each class. Matrix similarity is a special case of matrix equivalence. If two matrices are similar

Self-similarity matrix (542 words) [view diff] no match in snippet view article find links to article

vectors will show up as path of high similarity along diagonals of the matrix. Similarity plots are used for action recognition that is invariant to point of

Matrix (biology) (629 words) [view diff] case mismatch in snippet view article

metalloproteinase Matrix protein PAM matrix Position-specific scoring matrix Similarity matrix Substitution matrix Matrix Planting Matrix population models

SBK3 (2,118 words) [view diff] exact match in snippet view article find links to article

predicted transcription factor binding sites (TFBS) that had high matrix similarity scores, close proximity to the transcription start site (TSS), high

C1orf185 (1,220 words) [view diff] exact match in snippet view article find links to article

factors were found and analyzed using the ElDorado tool from Genomatix. Matrix similarity correlates to the confidence in the prediction for each individual

SNED1 (2,400 words) [view diff] exact match in snippet view article find links to article

845bp promoter. The following transcription factors were found with a matrix similarity of 1.00 and the entire binding domain was matched in the ElDorado

CLIP4 (1,601 words) [view diff] exact match in snippet view article find links to article

were chosen and organized based on proximity to the promoter and matrix similarity. The human CLIP4 mRNA sequence has 12 stem-loop structures in its

SNAP47 (1,838 words) [view diff] exact match in snippet view article find links to article

SNAP47 are SP1, TATAB, and CARF. SP1 or Stimulating protein 1 had a matrix similarity of 1.0 and is a ubiquitous zinc finger transcription factor and is

C11orf16 (710 words) [view diff] exact match in snippet view article find links to article

areas, and medulla. Some transcription factors that have the higher matrix similarity are Kruppel-like zinc finger protein 219, zinc finger protein 263

Euler's rotation theorem (4,230 words) [view diff] exact match in snippet view article find links to article

above is 1 + 2 cos φ. Since a trace is invariant under an orthogonal matrix similarity transformation, Tr[ARAT]=Tr[RATA]=Tr[R] with AT=A−1,{\displaystyle

FAM110A (772 words) [view diff] exact match in snippet view article find links to article

Matrix family Matrix information Start position End position Strand Matrix similarity TGF-β induced apoptosis proteins Cysteine-serine-rich nuclear protein

SMIM19 (2,273 words) [view diff] exact match in snippet view article find links to article

conservation among species first, and then further parsed for high matrix similarity and high number of proposed binding sites with in an extended SMIM19

TMEM275 (1,167 words) [view diff] exact match in snippet view article find links to article

20 TF binding site matches found by Genomatix and decided by high matrix similarity scores, proximity to possible transcription start sites, and/or high

Transmembrane protein 151A (2,205 words) [view diff] exact match in snippet view article find links to article

# Transcription factor description Matrix similarity 1 cAMP-responsive binding element 1 2 KRAB containing zinc finger protein 1 3 Huntington's disease

FGFR1OP2 (1,126 words) [view diff] exact match in snippet view article find links to article

FGFR1OP2 promoter Transcription factor (T.F.) Full name Function Matrix similarity Strand T.F. binds Sequence T.F. binds AP1 Activator protein 1 Differentiation

MAP11 (1,929 words) [view diff] case mismatch in snippet view article find links to article

Matrix Information Start Position End Position Anchor Position Strand Matrix Similarity Score Sequence Brachyury gene, mesoderm developmental factor T-box

TMEM247 (1,461 words) [view diff] exact match in snippet view article find links to article

Matrix Detailed matrix information Anchor base Strand Matrix similarity Sequence V$TBX5.01 Brachyury gene, mesoderm developmental factor 1040 (+) 1

TMEM221 (1,284 words) [view diff] case mismatch in snippet view article find links to article

Transcription Factor Detailed Matrix Information Anchor Base Matrix Similarity Sequence BRNF Brn POU domain factors 11 0.905 caaccatTAATctacttct KLFS

C20orf27 (3,092 words) [view diff] exact match in snippet view article find links to article

subclass of zinc-finger proteins, are predicted to give the highest matrix similarity. Predicted miRNA binding sites in 3' end of C20orf27 mRNA which sequences

KIAA2013 (1,669 words) [view diff] exact match in snippet view article find links to article

promoter sequence of KIAA2013. Here is a list of some that retain a high matrix similarity: Myeloid zinc finger MZF1 Zinc finger protein 750 FOXP1 KRAB-containing

FAM98A (2,448 words) [view diff] exact match in snippet view article find links to article

seven sites predicted to bind on the promoter, four of which had a Matrix similarity - optimum score of greater than or equal to 0.085 and the two highest

Alzheimer's Disease Neuroimaging Initiative (4,886 words) [view diff] no match in snippet view article find links to article

Zhu, Xiaofeng; Suk, Heung-Il; Shen, Dinggang (2014-10-15). "A novel matrix-similarity based loss function for joint regression and classification in AD

Glutamate-rich protein 4 (2,644 words) [view diff] case mismatch in snippet view article find links to article

TF Name Genomic Position with Human ERICH4 Promoter Strand of q19 Matrix Similarity Literature Supported Function V$CEBPA.01 CCAAT/Enhancer-binding Protein

ZNF337 (2,715 words) [view diff] case mismatch in snippet view article find links to article

Transcription Factor Detailed Matrix Information Anchor Base/Position Matrix Similarity Sequence TF2B Transcription factor II B (TFIIB) recognition element

TMEM39B (2,517 words) [view diff] exact match in snippet view article find links to article

TMEM39B Transcription Factors. Transcription factor Description Matrix similarity TCF11 TCF11/LCR-F1/Nrf1 homodimers 1 TFIIB Transcription factor II B

ISLR (4,000 words) [view diff] exact match in snippet view article find links to article

more transcription factor binding sites in ISLR with the highest matrix similarity (0.97~0.99) such as: Myeloid zinc finger 1 factor (MZF1) Nuclear factor