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Find link is a tool written by Edward Betts.searching for Matrix similarity 26 found (45 total)
alternate case: matrix similarity
Matrix equivalence
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representative matrices above are the simplest matrix for each class. Matrix similarity is a special case of matrix equivalence. If two matrices are similarSelf-similarity matrix (542 words) [view diff] no match in snippet view article find links to article
vectors will show up as path of high similarity along diagonals of the matrix. Similarity plots are used for action recognition that is invariant to point ofMatrix (biology) (629 words) [view diff] case mismatch in snippet view article
metalloproteinase Matrix protein PAM matrix Position-specific scoring matrix Similarity matrix Substitution matrix Matrix Planting Matrix population modelsSBK3 (2,118 words) [view diff] exact match in snippet view article find links to article
predicted transcription factor binding sites (TFBS) that had high matrix similarity scores, close proximity to the transcription start site (TSS), highC1orf185 (1,220 words) [view diff] exact match in snippet view article find links to article
factors were found and analyzed using the ElDorado tool from Genomatix. Matrix similarity correlates to the confidence in the prediction for each individualSNED1 (2,400 words) [view diff] exact match in snippet view article find links to article
845bp promoter. The following transcription factors were found with a matrix similarity of 1.00 and the entire binding domain was matched in the ElDoradoCLIP4 (1,601 words) [view diff] exact match in snippet view article find links to article
were chosen and organized based on proximity to the promoter and matrix similarity. The human CLIP4 mRNA sequence has 12 stem-loop structures in itsSNAP47 (1,838 words) [view diff] exact match in snippet view article find links to article
SNAP47 are SP1, TATAB, and CARF. SP1 or Stimulating protein 1 had a matrix similarity of 1.0 and is a ubiquitous zinc finger transcription factor and isC11orf16 (710 words) [view diff] exact match in snippet view article find links to article
areas, and medulla. Some transcription factors that have the higher matrix similarity are Kruppel-like zinc finger protein 219, zinc finger protein 263Euler's rotation theorem (4,230 words) [view diff] exact match in snippet view article find links to article
above is 1 + 2 cos φ. Since a trace is invariant under an orthogonal matrix similarity transformation, Tr[ARAT]=Tr[RATA]=Tr[R] with AT=A−1,{\displaystyleFAM110A (772 words) [view diff] exact match in snippet view article find links to article
Matrix family Matrix information Start position End position Strand Matrix similarity TGF-β induced apoptosis proteins Cysteine-serine-rich nuclear proteinSMIM19 (2,273 words) [view diff] exact match in snippet view article find links to article
conservation among species first, and then further parsed for high matrix similarity and high number of proposed binding sites with in an extended SMIM19TMEM275 (1,167 words) [view diff] exact match in snippet view article find links to article
20 TF binding site matches found by Genomatix and decided by high matrix similarity scores, proximity to possible transcription start sites, and/or highTransmembrane protein 151A (2,205 words) [view diff] exact match in snippet view article find links to article
# Transcription factor description Matrix similarity 1 cAMP-responsive binding element 1 2 KRAB containing zinc finger protein 1 3 Huntington's diseaseFGFR1OP2 (1,126 words) [view diff] exact match in snippet view article find links to article
FGFR1OP2 promoter Transcription factor (T.F.) Full name Function Matrix similarity Strand T.F. binds Sequence T.F. binds AP1 Activator protein 1 DifferentiationMAP11 (1,929 words) [view diff] case mismatch in snippet view article find links to article
Matrix Information Start Position End Position Anchor Position Strand Matrix Similarity Score Sequence Brachyury gene, mesoderm developmental factor T-boxTMEM247 (1,461 words) [view diff] exact match in snippet view article find links to article
Matrix Detailed matrix information Anchor base Strand Matrix similarity Sequence V$TBX5.01 Brachyury gene, mesoderm developmental factor 1040 (+) 1TMEM221 (1,284 words) [view diff] case mismatch in snippet view article find links to article
Transcription Factor Detailed Matrix Information Anchor Base Matrix Similarity Sequence BRNF Brn POU domain factors 11 0.905 caaccatTAATctacttct KLFSC20orf27 (3,092 words) [view diff] exact match in snippet view article find links to article
subclass of zinc-finger proteins, are predicted to give the highest matrix similarity. Predicted miRNA binding sites in 3' end of C20orf27 mRNA which sequencesKIAA2013 (1,669 words) [view diff] exact match in snippet view article find links to article
promoter sequence of KIAA2013. Here is a list of some that retain a high matrix similarity: Myeloid zinc finger MZF1 Zinc finger protein 750 FOXP1 KRAB-containingFAM98A (2,448 words) [view diff] exact match in snippet view article find links to article
seven sites predicted to bind on the promoter, four of which had a Matrix similarity - optimum score of greater than or equal to 0.085 and the two highestAlzheimer's Disease Neuroimaging Initiative (4,886 words) [view diff] no match in snippet view article find links to article
Zhu, Xiaofeng; Suk, Heung-Il; Shen, Dinggang (2014-10-15). "A novel matrix-similarity based loss function for joint regression and classification in ADGlutamate-rich protein 4 (2,644 words) [view diff] case mismatch in snippet view article find links to article
TF Name Genomic Position with Human ERICH4 Promoter Strand of q19 Matrix Similarity Literature Supported Function V$CEBPA.01 CCAAT/Enhancer-binding ProteinZNF337 (2,715 words) [view diff] case mismatch in snippet view article find links to article
Transcription Factor Detailed Matrix Information Anchor Base/Position Matrix Similarity Sequence TF2B Transcription factor II B (TFIIB) recognition elementTMEM39B (2,517 words) [view diff] exact match in snippet view article find links to article
TMEM39B Transcription Factors. Transcription factor Description Matrix similarity TCF11 TCF11/LCR-F1/Nrf1 homodimers 1 TFIIB Transcription factor II BISLR (4,000 words) [view diff] exact match in snippet view article find links to article
more transcription factor binding sites in ISLR with the highest matrix similarity (0.97~0.99) such as: Myeloid zinc finger 1 factor (MZF1) Nuclear factor