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searching for Perfect phylogeny 8 found (13 total)

Dan Gusfield (1,609 words) [view diff] exact match in snippet view article find links to article

network inference, haplotyping in DNA sequences, the multi-state perfect phylogeny problem using chordal graph theory, and fast algorithms for RNA folding

List of phylogenetics software (1,660 words) [view diff] case mismatch in snippet view article find links to article

Ray S, Safavi S, Bento J (2018). "Efficient Projection onto the Perfect Phylogeny Model". In Bengio S, Wallach H, Larochelle H, Grauman K, Cesa-Bianchi

Haplotype (1,973 words) [view diff] exact match in snippet view article find links to article

as the Hardy–Weinberg principle, the coalescent theory model, or perfect phylogeny. The parameters in these models are then estimated using algorithms

Tree model (5,766 words) [view diff] exact match in snippet view article find links to article

other states. A cladogram that conforms to these requirements is a perfect phylogeny. At first there seemed to be little consistency of results in trials

Chordal graph (2,164 words) [view diff] exact match in snippet view article find links to article

H. L.; Fellows, M. R.; Warnow, T. J. (1992), "Two strikes against perfect phylogeny" (PDF), Proc. of 19th International Colloquium on Automata Languages

Computational phylogenetics (8,072 words) [view diff] exact match in snippet view article find links to article

R, Rosch J, Bento J (22 August 2019). "Exact inference under the perfect phylogeny model". arXiv:1908.08623. Bibcode:2019arXiv190808623R. {{cite journal}}:

2-satisfiability (9,112 words) [view diff] exact match in snippet view article find links to article

Richard M. (2003), "Efficient reconstruction of haplotype structure via perfect phylogeny", Journal of Bioinformatics and Computational Biology, 1 (1): 1–20

Tumour heterogeneity (6,937 words) [view diff] exact match in snippet view article find links to article

that finding a solution in polynomial time is improbable. Standard perfect phylogeny reconstruction approaches have not been applicable due to the high