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searching for Indel 53 found (77 total)

alternate case: indel

Delhi (17,444 words) [view diff] no match in snippet view article find links to article

Delhi, officially the National Capital Territory (NCT) of Delhi, is a city and a union territory of India containing New Delhi, the capital of India. Lying

Pileup format (575 words) [view diff] exact match in snippet view article find links to article

to a reference sequence. This format facilitates visual display of SNP/indel calling and alignment. It was first used by Tony Cox and Zemin Ning at the

Weirs (album) (32 words) [view diff] exact match in snippet view article

"Path T'Zoar" 13:24 3. "Reservoir" 19:19 4. "(This Can) Robotic" 5:41 5. "Indel Rooks" 11:19 6. "Aple" 4:30 7. "Thing Bounces Back" 12:21 8. "Weirs" 2:00

Streptomycetaceae (604 words) [view diff] exact match in snippet view article find links to article

actinomycetotal genomes have led to the identification of three conserved signature indels which are unique to the order Streptomycetales. The enzyme PBGD contains

LDL receptor (3,035 words) [view diff] exact match in snippet view article find links to article

Individuals with disruptive mutations (defined as nonsense, splice site, or indel frameshift) in LDLR have an average LDL-cholesterol of 279 mg/dL, compared

List of sequence alignment software (2,355 words) [view diff] exact match in snippet view article find links to article

longer reads, with multiple indels and splices (see entry above under Genomics analysis); GSNAP: shorter reads, with one indel or up to two splices per read

Pseudonocardiaceae (656 words) [view diff] exact match in snippet view article find links to article

bootstrap replications of the phylogenetic trees. A conserved signature indel has been identified which is found in N. multipartite and all but one of

PVC superphylum (1,056 words) [view diff] exact match in snippet view article find links to article

by this clade that is distinct from other bacteria. Conserved signature indels (CSIs) have also been found specific for the Planctomycetota, Verrucomicrobiota

List of rural localities in Murmansk Oblast (360 words) [view diff] exact match in snippet view article find links to article

Severomorsk-3 Shchukozero Rural localities in Tersky District: Chapoma Chavanga Indel Kashkarantsy Kuzomen Mayak Nikodimsky Olenitsa Pyalitsa Tetrino Varzuga

Bhil (2,831 words) [view diff] exact match in snippet view article find links to article

their Lion god, Bhairav dev is their dog god. Some of their other gods are Indel dev, Bada dev, Mahadevel, Tejaji, Lotha mai, Techma, Orka Chichma and Kajal

Isozyme (1,461 words) [view diff] exact match in snippet view article find links to article

Allozymes may result from point mutations or from insertion-deletion (indel) events that affect the coding sequence of the gene. As with any other new

Pacific Coast tick fever (136 words) [view diff] case mismatch in snippet view article find links to article

K., Karpathy, S.E., Eremeeva, M.E. and Dasch, G.A. "Insertion/deletion (INDEL) typing of isolates of Rickettsia rickettsii." Georgia Research Alliance

Pegasoferae (452 words) [view diff] exact match in snippet view article find links to article

Montgelard, Claudine; Pardini, Amanda T.; Robinson, Terence J. (2007). "Indel evolution of mammalian introns and the utility of non-coding nuclear markers

MacVector (363 words) [view diff] case mismatch in snippet view article find links to article

primer design and testing. Also uses primer3 Agarose Gel simulation. CRISPR INDEL analysis. MacVector has a contig assembly plugin called Assembler that uses

Optimal matching (967 words) [view diff] exact match in snippet view article find links to article

a D e l ) {\displaystyle c(a^{\rm {Ins}})=c(a^{\rm {Del}})} ; the term indel cost usually refers to the common cost of insertion and deletion. Considering

Ferae (1,787 words) [view diff] exact match in snippet view article find links to article

Montgelard, Claudine; Pardini, Amanda T.; Robinson, Terence J. (2007). "Indel evolution of mammalian introns and the utility of non-coding nuclear markers

Bacteroidota (1,839 words) [view diff] exact match in snippet view article find links to article

may have evolved after the divergence of S. ruber. A conserved signature indel has also been identified; this three-amino-acid deletion in ClpB chaperone

Gram-positive bacteria (2,655 words) [view diff] exact match in snippet view article find links to article

between the monoderm and diderm bacteria is supported by conserved signature indels in a number of important proteins (viz. DnaK, GroEL). Of these two structurally

Gram-negative bacteria (2,444 words) [view diff] exact match in snippet view article find links to article

Acidobacteriota; "Hydrobacteria") are uniquely identified by a few conserved signature indel (CSI) in the HSP60 (GroEL) protein. In addition, a number of bacterial taxa

Genome project (1,822 words) [view diff] exact match in snippet view article find links to article

assembly of human-sized genomes, alignment, SNP detection, resequencing, indel finding, and structural variation analysis. Since the 1980s, molecular biology

Multiple Epidermal Growth Factor-like Domains 8 (3,523 words) [view diff] exact match in snippet view article find links to article

two isoform constructs known for MEGF8, which differ by a 67 amino acid indel. The isoform 2 splice version (analyzed throughout this page) is 2785 amino

Peridinium (2,093 words) [view diff] exact match in snippet view article find links to article

cystiferum Pavillard Peridinium dakariensis P.A.Dangeard Peridinium dalei Indel.& Loeblich Balech Peridinium deficiens A.F.Meunier Peridinium delitiense

KoVariome (175 words) [view diff] exact match in snippet view article find links to article

Standard Reference Variome database of whole genomes with comprehensive SNV, indel, CNV, and SV analyses". Scientific Reports. 8 (1): 5677. doi:10.1038/s41598-018-23837-x

Pan-genome (5,348 words) [view diff] exact match in snippet view article find links to article

up to 12 genomes. In 2023, BRIDGEcerealwas developed to survey and graph indel-based haplotypes from pan-genome through a gene model ID. In 2020 Anvi'o

Desmin (2,655 words) [view diff] exact match in snippet view article find links to article

Gaertner-Rommel A, Walhorn V, et al. (March 2018). "A novel desmin (DES) indel mutation causes severe atypical cardiomyopathy in combination with atrioventricular

Zooamata (485 words) [view diff] exact match in snippet view article find links to article

Montgelard, Claudine; Pardini, Amanda T.; Robinson, Terence J. (2007). "Indel evolution of mammalian introns and the utility of non-coding nuclear markers

Actinomyces (1,473 words) [view diff] exact match in snippet view article find links to article

sequences. This clade is also strongly supported by a conserved signature indel consisting of a three-amino-acid insertion in isoleucine tRNA synthetase

Intermediate filament (3,168 words) [view diff] exact match in snippet view article find links to article

Gaertner-Rommel A, Walhorn V, et al. (March 2018). "A novel desmin (DES) indel mutation causes severe atypical cardiomyopathy in combination with atrioventricular

KCNQ2 developmental and epileptic encephalopathy (539 words) [view diff] exact match in snippet view article find links to article

receptors). KCNQ2 encephalopathy is caused by heterozygous missense or in-frame indel mutations shown to have a dominant negative (DN; >50% reduction of the M-current

Mangifera odorata (1,240 words) [view diff] case mismatch in snippet view article find links to article

Darlon V.; Ocampo, Eureka Teresa M. (December 2022). "Genome-wide SNP and InDel analysis of three Philippine mango species inferred from whole-genome sequencing"

Sequence analysis in social sciences (10,017 words) [view diff] exact match in snippet view article find links to article

Strategies for setting the substitution and indel costs Constant costs (all substitution costs identical and single indel cost) Theory-based costs Feature-based

SNP annotation (4,230 words) [view diff] exact match in snippet view article find links to article

sequence encoded by the gene, including single base changes and non frameshift indels. It has been extremely investigated the function of non-synonymous variants

Reference genome (3,338 words) [view diff] exact match in snippet view article find links to article

"Genome assembly quality: Assessment and improvement using the neutral indel model". Genome Research. 20 (5): 675–684. doi:10.1101/gr.096966.109. ISSN 1088-9051

Chlorobium (1,047 words) [view diff] exact match in snippet view article find links to article

indels which are uniquely found in members of the phylum Chlorobiota (formerly Chlorobi) and are thus characteristic of the phylum. The first indel is

Nematode (7,446 words) [view diff] exact match in snippet view article find links to article

within the Adenophorea. In 2019, a study identified one conserved signature indel (CSI) found exclusively in members of the phylum Nematoda through comparative

Sequence analysis (3,886 words) [view diff] exact match in snippet view article find links to article

could be single nucleotide variants (SNVs), small insertions/deletions (indels), and large structural variants. The read alignments are sorted using SAMtools

Margaret Oakley Dayhoff (2,558 words) [view diff] exact match in snippet view article find links to article

matrix, a Dayhoff scoring matrix may be constructed. Along with a model of indel events, alignments generated by these methods can be used in an iterative

Genome size (5,094 words) [view diff] exact match in snippet view article find links to article

number of lost genes and length of the spacers. The event of small local indels plays a marginal role on the genome reduction especially in the early stages

Kupari (1,852 words) [view diff] exact match in snippet view article find links to article

wedding feast.) Haira (Engagement) Variety of fish gravies (specially Bombil) Indel (specially prepared meat/fish to last for certain days) anglicized vidialo

Hui people (15,700 words) [view diff] case mismatch in snippet view article find links to article

between Ningxia Hui and eastern Asian populations revealed by a set of InDel loci". Royal Society Open Science. 7 (1): 190358. Bibcode:2020RSOS....790358Z

DNA sequencing theory (2,875 words) [view diff] exact match in snippet view article find links to article

PMID 18987736. Wendl MC, Wilson RK (2009). "Statistical aspects of discerning indel-type structural variation via DNA sequence alignment". BMC Genomics. 10:

BGI Group (5,150 words) [view diff] exact match in snippet view article find links to article

assembly of human-sized genomes, alignment, SNP detection, resequencing, indel finding, and structural variation analysis. Built for the Illumina sequencers'

Mexicans (17,303 words) [view diff] case mismatch in snippet view article find links to article

(December 2017). "Genetic diversity of Mexican-Mestizo populations using 114 INDEL polymorphisms". Forensic Science International: Genetics Supplement Series

PrecisionFDA (1,658 words) [view diff] exact match in snippet view article find links to article

Afshar, Pegah T.; Gross, Sam S. (November 2018). "A universal SNP and small-indel variant caller using deep neural networks". Nature Biotechnology. 36 (10):

List of RNA-Seq bioinformatics tools (20,371 words) [view diff] case mismatch in snippet view article find links to article

insertion/deletion (INDEL) polymorphisms, and simulate reads with uniform substitution sequencing errors. It does not generate INDEL sequencing errors,

Genome sequencing of endangered species (2,267 words) [view diff] exact match in snippet view article find links to article

through population-genomic approaches that rely on the detection of SNPs, indel or CNV. From one side of the coin, data derived from high throughput sequencing

HRDetect (1,809 words) [view diff] exact match in snippet view article find links to article

substitutions Indels with microhomology at the indel breakpoint junction, indels at polynucleotide-repeat tracts and other complex indels as proportions

Rajeev Kumar Varshney (4,853 words) [view diff] case mismatch in snippet view article find links to article

Pradeep; Edwards, David; Varshney, Rajeev K. (2015). "CicArVarDB: SNP and InDel database for advancing genetics research and breeding applications in chickpea"

Adaptive evolution in the human genome (4,272 words) [view diff] exact match in snippet view article find links to article

detect selection in non-coding sequences examines insertions and deletions (indels), rather than point mutations (Lunter et al. 2006), although the method

2021 in Latin music (4,843 words) [view diff] exact match in snippet view article find links to article

Sony Music Latin Tres Historias Concertantes Héctor Infanzón Classical Indel 6 Es Merengue ¿Algún Problema? Sergio Vargas Merengue J&N 7 Luz No Te Va

Timeline of biotechnology (24,284 words) [view diff] case mismatch in snippet view article find links to article

Kyungjae (March 2022). "Precision targeting tumor cells using cancer-specific InDel mutations with CRISPR-Cas9". Proceedings of the National Academy of Sciences

Phonological history of Old Irish (6,328 words) [view diff] exact match in snippet view article find links to article

early Irish to break up a newly word-final consonant cluster. *andelom indel(l) "arrangement" Maybe MacNeill's law may have been still synchronically

January–March 2022 in science (14,769 words) [view diff] case mismatch in snippet view article find links to article

Kyungjae (March 2022). "Precision targeting tumor cells using cancer-specific InDel mutations with CRISPR-Cas9". Proceedings of the National Academy of Sciences