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searching for GC-content 128 found (318 total)

alternate case: gC-content

Gene conversion (3,004 words) [view diff] no match in snippet view article find links to article

selective pressure. GC content varies widely in the human genome (40–80%), but there seem to be large sections of the genome where GC content is, on average

Genome evolution (4,940 words) [view diff] exact match in snippet view article find links to article

commonly referred to as A, G, C, and T. The GC-content is the percentage of G & C bases within a genome. GC-content varies greatly between different organisms

Amycolatopsis (956 words) [view diff] exact match in snippet view article find links to article

Amycolatopsis is a genus of high GC-content bacteria within the family Pseudonocardiaceae. The genus is known for producing many types of antibiotics,

Rhodoferax (1,442 words) [view diff] no match in snippet view article find links to article

genome contains a 4.71 Mbp chromosome with 59.9% GC content and a 257-kbp plasmid with 54.4% GC content. It has 4,169 protein-coding genes, six rRNA genes

Pseudomonas chlororaphis (465 words) [view diff] no match in snippet view article find links to article

fluorescens species complex, as determined by. The protein count and GC content of the strains of this species ranged between 5599 and 6401 (average:

Anelloviridae (738 words) [view diff] no match in snippet view article find links to article

non-coding region with one to two 80–110 nt sequences that contain high GC content, forming a secondary structure of stems and loops. The genome has ORFs

In silico PCR (867 words) [view diff] exact match in snippet view article find links to article

selectivity. Efficiency involves taking into account such factors as GC-content, efficiency of binding, complementarity, secondary structure, and annealing

Polyplacotoma (191 words) [view diff] no match in snippet view article find links to article

Polyplacotomia. P. mediterranea has the smallest mitogenome, the lowest GC content, and the smallest intergenic spacer regions of all placozoans. Their bodily

Nitrospira inopinata (292 words) [view diff] no match in snippet view article find links to article

was released in 2015 represented by 3.3 Mbp, with 3 116 genes and 59.2% GC content. NCBI accession number is LN885086. Daims, Holger; Lebedeva, Elena V.;

Afifella (727 words) [view diff] no match in snippet view article find links to article

as strain DSM 2698T and has a GC content of 63.8 mol%. A. pfennigii is designated as strain DSM17143T and has a GC content of 63.8 mol%. A. aestuarii is

Hokovirus (322 words) [view diff] no match in snippet view article find links to article

after KNV (1.57 million base pairs, 1272 gene families) and Catovirus. GC content is 21.4 % Classification of metagenome, made by analyzing 18S rRNA indicate

Indivirus (311 words) [view diff] no match in snippet view article find links to article

This is the smallest genome among Klosneuviruses as mentioned above. GC content is 26.6 % Classification of metagenome, made by analyzing 18S rRNA indicate

Azospirillum brasilense (762 words) [view diff] no match in snippet view article find links to article

sequenced and is 7Mbp in size and spread across 7 chromosomes. The high GC content (70%) makes it challenging to engineer. Sp245 can be transformed with

Chitra Dutta (477 words) [view diff] exact match in snippet view article find links to article

adaptation involves overrepresentation of purine bases in mRNAs, higher GC-content of the structural RNAs and enhanced usage of positively charged residues

Catovirus (324 words) [view diff] no match in snippet view article find links to article

Klosneuviruses after KNV (1.57 million base pairs, 1272 gene families). GC content is 26.4 % Classification of metagenome, made by analyzing 18S rRNA indicate

Pseudomonas balearica (444 words) [view diff] exact match in snippet view article find links to article

of the species have a size that vary between 4.2 and 4.4 Mb and have a GC-content that ranges from 64.6 to 65.1%. Bennasar; Rosselló-Mora, R; Lalucat, J;

Gene desert (3,458 words) [view diff] no match in snippet view article find links to article

distance. GC content is therefore indication for the presence of coding or regulatory processes in DNA. While stable gene deserts have higher GC content, this

Silvanigrella aquatica (278 words) [view diff] no match in snippet view article find links to article

Oligoflexia. The type strain MWH-Nonnen-W8red is remarkable due to its low GC content, its pigmentation and its plastic morphology. Of further interest is the

Drifty gene hypothesis (959 words) [view diff] no match in snippet view article find links to article

signatures at a higher rate than in random genes selected for matched GC content and recombination rate. These two papers provide strong evidence against

DXZ4 (516 words) [view diff] no match in snippet view article find links to article

have been described in humans and share similar features, such as high GC content, large repeat monomers, and high variability for repeat copy number within

CAG promoter (444 words) [view diff] no match in snippet view article find links to article

highly conserved among vertebrates. The 3' part of the promoter has high GC content and is thus refractory to PCR amplification. Some of the CAG promoter's

Acetatifactor muris (226 words) [view diff] exact match in snippet view article find links to article

anaerobic, and non-motile. The organism does not form spores, and its GC-content is 48%. It does not metabolize glucose, and it tests positive for phenylalanine

Othello Washington (344 words) [view diff] no match in snippet view article find links to article

isolating and discovering plasmids. Washington published a paper on the GC content of Proteus species with Stan Falkow, contributing the earliest knowledge

Caldococcus (990 words) [view diff] exact match in snippet view article find links to article

against Desulfurococcus RNA polymerase. It has a GC-content of 41.0 ± 0. 2 mol%. Due to its GC-content and its morphological and physiological properties

Neisseria meningitidis (4,640 words) [view diff] no match in snippet view article find links to article

(ORFs), compared to 2.27 Mb and 2,465 ORFs for MC58. Both strains have a GC content of 51.5%. A comparison with MC58 showed that four genes are uniquely present

Encephalitozoon intestinalis (535 words) [view diff] no match in snippet view article find links to article

content, order and density over most of their genomes which have similar GC content. They also contain the same complement of transfer RNAs and ribosomal

Muti (1,418 words) [view diff] no match in snippet view article find links to article

Saulo M (2016). "RDNA mapping, heterochromatin characterization and AT/GC content of Agapanthus africanus (L.) Hoffmanns (Agapanthaceae)". Anais da Academia

Mutation bias (3,353 words) [view diff] no match in snippet view article find links to article

responsible for genomes with high GC content, and likewise the opposite bias is responsible for genomes with low GC content. Starting in the 1990s, it became

Unique properties of hyperthermophilic archaea (2,551 words) [view diff] no match in snippet view article find links to article

analysis showed a GC content of 54.90%. This supports the hypothesis that thermophiles experience selective pressure to increase their GC content in order to

Exitron (1,318 words) [view diff] no match in snippet view article find links to article

higher GC content than intron regions and constitutive introns. However, they are of similar size to constitutive exons and their GC content is lower

Capnocytophaga (1,776 words) [view diff] no match in snippet view article find links to article

gene (GenBank nucleotide sequence under accession number GQ217533). The GC content (38%) of this gene, its genetic environment, the lack of conjugal transfer

Guide RNA (3,624 words) [view diff] no match in snippet view article find links to article

nucleotides upstream of the PAM. The optimal GC content of the guide sequence should be over 50%. A higher GC content enhances the stability of the RNA-DNA duplex

EcoRI (891 words) [view diff] case mismatch in snippet view article find links to article

Gao, T; Konomura, S; May, C; Nich, C (April 2015). "Increasing Overhang GC-Content Increases Sticky-End Ligation Efficiency" (PDF). Journal of Experimental

GeneMark (1,484 words) [view diff] no match in snippet view article find links to article

starts may vary. Also, it was observed that prokaryotic genome may exhibit GC content variability due to the lateral gene transfer. The new algorithm, GeneMarkS-2

Galactokinase deficiency (720 words) [view diff] no match in snippet view article find links to article

many features in common with other housekeeping genes, including high GC content, several copies of the binding site for the Sp1 transcription factor and

Gene cluster (1,918 words) [view diff] exact match in snippet view article find links to article

ISBN 978-1-4292-3413-9. Galtier N, Piganeau G, Mouchiroud D, Duret L (October 2001). "GC-content evolution in mammalian genomes: the biased gene conversion hypothesis"

BASys (576 words) [view diff] no match in snippet view article find links to article

DNA. Glimmer's performance decreases with increasing GC Content. For genomes with high GC content (>60%), Glimmer may generate a high number of false positive

Micrococcus luteus (678 words) [view diff] exact match in snippet view article find links to article

synonymous codon choice in Micrococcus luteus, a bacterium with a high genomic GC-content". Nucleic Acids Res. 18 (6): 1565–1569. doi:10.1093/nar/18.6.1565. PMC 330526

Bacillus phage (650 words) [view diff] no match in snippet view article find links to article

ranges from 7,826 (in phage pMC8) to 509,170 bp (in phage pHS181) with the GC content of these phage being an average of 38.25%. Within Bacillus phage there

Rubella virus (1,703 words) [view diff] no match in snippet view article find links to article

any currently known single stranded RNA virus (~70%). Despite this high GC content its codon use is similar to that of its human host. The viruses attach

Bacterial genome (4,428 words) [view diff] no match in snippet view article find links to article

particularities, such as rapid evolution of polypeptide sequences and low GC content in the genome. The convergent evolution of these qualities in unrelated

Sulfurisphaera tokodaii (435 words) [view diff] no match in snippet view article find links to article

Kyushu Island, Japan. Strain 7 has a genome size of 2.7 Mbp, as well as a GC content of 32.8%. It has approximately 2,826 identified genes. The GenBank accession

Batravirus ranidallo1 (1,616 words) [view diff] no match in snippet view article find links to article

approximately 217kbp in size. The genome is highly linear in structure and has a GC content of 45-47%. RaHV-1 and similar amphibian herpesviruses have been placed

Nosocomiicoccus (195 words) [view diff] exact match in snippet view article find links to article

bacterial chromosome has an estimated size of about 1.650.00 nt, and a GC-content of 36.5%. About 1700 proteins are encoded on the chromosome, and about

Plasmid (5,331 words) [view diff] no match in snippet view article find links to article

viral DNA and fungal plasmids, like fungal plasmids they also have low GC content, these observations have led to some hypothesizing that these linear plasmids

Virusoid (2,615 words) [view diff] no match in snippet view article find links to article

inaccessible and resistant to exonucleases. Additionally, their high GC content and high degree of self-complementarity make them very stable against

Abiotrophia (636 words) [view diff] no match in snippet view article find links to article

showing it to have 3291 protein encoded in a 3.4774 Mbp genome with a GC content of 37.0% Formerly classified as nutritionally variant streptococci, A

Codon usage bias (3,178 words) [view diff] no match in snippet view article find links to article

the translation process by tRNA abundance), guanine-cytosine content (GC content, reflecting horizontal gene transfer or mutational bias), guanine-cytosine

Mycobacterium orygis (353 words) [view diff] no match in snippet view article find links to article

tuberculosis meningitis in 1997, has a 4.4 Mbp genome, 4032 genes and a GC content of 65.6%. This species is a pathogen of oryx, deer, dairy cattle, rhesus

Suillus grevillei (633 words) [view diff] no match in snippet view article find links to article

the cosmid library is 1 per 3900 bp of genomic DNA. The genome has a GC content of 49.8%. List of North American boletes Larch bolete, other species of

Temperature gradient gel electrophoresis (1,639 words) [view diff] no match in snippet view article find links to article

gel electrophoresis. However, sequence variations (i.e. differences in GC content and distribution) between different microbial rRNAs result in different

Clonorchis sinensis (3,362 words) [view diff] no match in snippet view article find links to article

published in 2011. The total genome size is estimated to be 580 MB, and the GC content was calculated as about 43.85%. About 16,000 genes are predicted, out

Leptospira (3,029 words) [view diff] no match in snippet view article find links to article

which 656 are pathogenic specific genes. The guanine plus cytosine (GC) content is between 35% and 41%. L. borgpetersenii serovar Hardjo is usually transmitted

Pseudomonas fluorescens (3,234 words) [view diff] no match in snippet view article find links to article

the P. fluorescens group comprised 1396 proteins. The protein count and GC content of the strains of the P. fluorescens group ranged between 4152 and 6678

Glossary of cellular and molecular biology (0–L) (24,231 words) [view diff] exact match in snippet view article

percentage. DNA and RNA molecules with higher GC-content are generally more thermostable than those with lower GC-content due to molecular interactions that occur

Aphanizomenon ovalisporum (411 words) [view diff] no match in snippet view article find links to article

of Aphanizomenon ovalisporum is approximately 7.47 Mbp in size, with a GC content of 50.39%. There are 2851 coding sequences. The strain analyzed was isolated

Artificial gene synthesis (7,073 words) [view diff] exact match in snippet view article find links to article

secondary structures caused by inverted repeats, extraordinary high or low GC-content, or repetitive structures. Usually these segments of a particular gene

Human Genome Project (7,206 words) [view diff] no match in snippet view article find links to article

Strippoli, P.; Caracausi, M.; Vitale, L. (2019). "On the length, weight and GC content of the human genome". BMC Research Notes. 12 (1): 106. doi:10.1186/s13104-019-4137-z

Lactiplantibacillus plantarum (2,373 words) [view diff] no match in snippet view article find links to article

molecular details. The chromosome contains 3,308,274 base pairs. The GC content of L. plantarum is 44.45% with the average protein count 3063. According

Arthrobacter globiformis (874 words) [view diff] no match in snippet view article find links to article

approximately 4.89 million base pairs long, containing 4305 proteins and a 66.1% GC content. Two major phylogenetic clades exist within the Arthrobacter genus, the

Vibrio lentus (475 words) [view diff] no match in snippet view article find links to article

"by performing ribotyping and DNA–DNA hybridization, by analysing DNA+GC content and cultural and physiological features, and by phylogenetic studies of

Gene (12,720 words) [view diff] no match in snippet view article find links to article

Strippoli P, Caracausi M, and Vitale L (2019). "On the length, weight and GC content of the human genome". BMC Research Notes. 12 (1): 106–173. doi:10.1186/s13104-019-4137-z

Pseudomonas citronellolis (776 words) [view diff] no match in snippet view article find links to article

is 6,951,444 bp with the size of DNA coding 6,028,113 bp. The average GC content is 67.11% and 4,665,300 bp . Of the 6169 predicted genes, 6071 (98.41%)

Biomedical data science (1,025 words) [view diff] no match in snippet view article find links to article

Strippoli, Pierluigi; Vitale, Lorenza (2019). "On the length, weight and GC content of the human genome". BMC Research Notes. 12 (1): 106. doi:10.1186/s13104-019-4137-z

Idiomarina loihiensis (296 words) [view diff] no match in snippet view article find links to article

Hawaii. The genome has been sequenced and contains 2,839,318 bp, with a GC content of 47.04%, encoding 2640 protein coding genes. These include many enzymes

Rathayibacter toxicus (2,502 words) [view diff] no match in snippet view article find links to article

Megabases and an average GC content of 61.5%. Strain WAC3373 serves as the reference organism with a genome size of 2.35 Mb, GC content of 61.5%, 2165 total

Lacticaseibacillus rhamnosus (2,456 words) [view diff] no match in snippet view article find links to article

tooth, consists of a circular chromosome of 2,934,954 bp with 46.78% GC content. This genome contains 2,749 total genes with 2,672 that are total protein-coding

UGENE (1,486 words) [view diff] exact match in snippet view article find links to article

window: 3D structure view Circular view Chromatogram view Graphs View: GC-content, AG-content, and other Dot plot view The Alignment Editor allows working

Naegleria (2,021 words) [view diff] no match in snippet view article find links to article

a 41 Mb nuclear genome with 15,727 protein-coding genes. It has a 33% GC content, and 57.8% of the genome is coding with about 36% consisting of introns

METAGENassist (724 words) [view diff] no match in snippet view article find links to article

categories, including oxygen requirements, energy source(s), metabolism, and GC content. This gives users substantially more features with which to compare and

Lacrimispora indolis (471 words) [view diff] no match in snippet view article find links to article

indolis DSM 775 contains 6,383,701 bp in its circular chromosome with a GC content of 44.93%. Upon sequencing the genome, it was found that it contains an

Melting curve analysis (1,448 words) [view diff] no match in snippet view article find links to article

hydrogen bonding between two strands of DNA is dependent on their length, GC content and their complementarity. By heating a reaction-mixture that contains

Crenobacter cavernea (373 words) [view diff] no match in snippet view article find links to article

NCBI Prokaryotic Genome Annotation Pipeline was able to identify a 65.9% GC content and sequencing coding for proteins and tRNA. "2,779 protein coding sequences

Genome size (5,094 words) [view diff] no match in snippet view article find links to article

Strippoli P, Caracausi M, Vitale L (2019). "On the length, weight and GC content of the human genome". BMC Res Notes. 12 (1): 106. doi:10.1186/s13104-019-4137-z

Volvox carteri (1,768 words) [view diff] no match in snippet view article find links to article

approximately 82% of the genome is non-coding. The V. carteri genome has a GC content of approximately 55.3%. Over 99% of the volume of a V. carteri colony

DNA oxidation (4,790 words) [view diff] exact match in snippet view article find links to article

genes prone to be actively transcribed are densely distributed in high GC-content regions of the genome. They then described three modes of gene regulation

Elizabethkingia anophelis (1,379 words) [view diff] no match in snippet view article find links to article

rod-like shape and a genome size of around 4.03 Mbp, with an average GC content of 35.4%. E. anophelis is known to be a prevalent inhabitant in the gut

Nitratiruptor (461 words) [view diff] no match in snippet view article find links to article

is composed by a single circular chromosome of 1,877,931 bp with the GC content of 43.8% and 39.7%. Due to the geochemical variability in the deep-sea

Nitrospira moscoviensis (1,254 words) [view diff] no match in snippet view article find links to article

moscoviensis’s genome was sequenced by Dr. Ehrich et al. Its 4.59 Mb genome has a GC content of 56.9+/-0.4 mol% with a predicted 4,863 coding sequences. N. moscoviensis's

Intrinsically disordered proteins (6,004 words) [view diff] no match in snippet view article find links to article

of analyzing IDPs, such as studies based on quantitative analysis of GC content in genes and their respective chromosomal bands, have been used to understand

Sporosarcina ureae (1,300 words) [view diff] no match in snippet view article find links to article

and household genes, among others. Claus et al. (1983) determined the GC content of S.ureae to be 40.6-40.8%. S. ureae is closely related to other spore-forming

Streptomyces antibioticus (1,322 words) [view diff] no match in snippet view article find links to article

the Actinomycetes, the S. antibioticus genome is known to have a high GC content (>55%). Streptomyces species produce differentiated, branch-like structures

Bacteriovorax (860 words) [view diff] no match in snippet view article find links to article

time and is the type strain of Bacteriovorax stolpii. This isolate has a GC content of 41±8 mol%. The optimal temperature range for growth of this organism

Schistosoma mansoni (6,881 words) [view diff] no match in snippet view article find links to article

by a chromosomal mechanism. The genome is approximately 270 MB with a GC content of 34%, 4–8% highly repetitive sequence, 32–36% middle repetitive sequence

Bacteroides caccae (1,011 words) [view diff] no match in snippet view article find links to article

saccharolytic anaerobic, nonmotile Gram-negative bacteria. They have a DNA GC content of 40-46 mol %. Growth occurs at human temperature (37 °C) under anaerobic

Phycodnaviridae (9,384 words) [view diff] no match in snippet view article find links to article

double-stranded DNA genomes ranging from 100kb to over 550 kb with 40% to 50% GC content. Currently, complete genome sequences are available for several members

List of alignment visualization software (183 words) [view diff] no match in snippet view article find links to article

to predict evolutionary relationships, explore sequence tracks to view GC content, gap fraction, sequence logos, translation ABI, DNA Multi-Seq, FASTA,

Haloterrigena turkmenica (1,257 words) [view diff] no match in snippet view article find links to article

determine the GC (Guanine - Cytosine) content of H. turkmenica's genome. The GC content of H. turkmenica was determined to be 64% for its draft genome with 49

Arthrobacter alkaliphilus (986 words) [view diff] no match in snippet view article find links to article

alkaliphilus. Also shown is the 1457 bp sequence length and corresponding GC content which is 60 mol%. 1 tggctcagga tgaacgctgg cggcgtgctt aacacatgca agtcgaacga

Cellulosimicrobium cellulans (2,113 words) [view diff] no match in snippet view article find links to article

contains 17 assembled genomes for Cellulosmicrobium cellulans. The median GC content for this species is 74.3771%, with a median total length of 4.32208 Mb

Legionella jordanis (1,411 words) [view diff] exact match in snippet view article find links to article

amplification were done under standard conditions. However, due to low GC-content and the mismatching of base pairs, the temperature used during subtractive

MYH9 (6,346 words) [view diff] no match in snippet view article find links to article

of MYH9 is typical of housekeeping genes having no TATA box but high GC content, with multiple GC boxes. MYH9 is a well-conserved gene through evolution

Pseudomonas syringae (5,780 words) [view diff] no match in snippet view article find links to article

syringae group comprised 2944 proteins, whereas the protein count and GC content of the strains of this group ranged between 4973 and 6026 (average: 5465)

Thermotoga naphthophila (1,736 words) [view diff] no match in snippet view article find links to article

4-186.8°F). According to a 16S rDNA sequence analysis, its 1,809,823 GC content was 46.1 mol% which increases thermostability of the DNA. Thermotoga naphthophila

Housekeeping gene (4,612 words) [view diff] no match in snippet view article find links to article

housekeeping gene promoters are generally depleted of TATA-box, have high GC content and high incidence of CpG Islands. In Drosophila, where promoter specific

Lactococcus garvieae (1,889 words) [view diff] no match in snippet view article find links to article

as the presence of insertion sequences flanked on both ends, different GC content from the chromosomal average, integration into the locus syntenic to other

Lactococcus garvieae (1,889 words) [view diff] no match in snippet view article find links to article

as the presence of insertion sequences flanked on both ends, different GC content from the chromosomal average, integration into the locus syntenic to other

CYB5R3 (2,096 words) [view diff] no match in snippet view article find links to article

elements, but has the sequence G-G-G-C-G-G a total of five times. The GC content of this 5' portion of the gene is 86%, much higher than the average GC

Microsporum nanum (2,238 words) [view diff] no match in snippet view article find links to article

mitochondrial DNA in M. nanum is 24,105 basepairs. The DNA is AT-rich and the GC content is only 24.47%. M. nanum mtDNA has 15 protein-coding genes, including

Stigmatella aurantiaca (2,684 words) [view diff] no match in snippet view article find links to article

circular DNA chromosome consists of 10.26 million base pairs and has a GC content of 67.5%. 8407 genes have been identified, coding for 8352 proteins. The

Computational phylogenetics (8,072 words) [view diff] no match in snippet view article find links to article

One possible variation on this theme adjusts the rates so that overall GC content - an important measure of DNA double helix stability - varies over time

Macromonas bipunctata (1,583 words) [view diff] no match in snippet view article find links to article

catalogued: it is 1461 bp. The same study shows that the genome contains 67.6% GC content. Macromonas bipunctata has been cultured in many studies that show H2O2

Ralstonia pseudosolanacearum (562 words) [view diff] no match in snippet view article find links to article

in addition to the potential implications of latent infections. Median GC content: 66.9327% Genome size (Mp): 5.75905 Strain Tg03 Genome size (genes): 5463

Methylobacillus flagellatus (1,992 words) [view diff] no match in snippet view article find links to article

methylotroph. Overall characteristics of the M. flagellatus genome include 53.7% GC content and 143,032 base pairs that are direct repeats. Furthermore, there are

RNA-Seq (11,029 words) [view diff] no match in snippet view article find links to article

However, different PCR efficiency on particular sequences (for instance, GC content and snapback structure) may also be exponentially amplified, producing

CUT&Tag sequencing (1,292 words) [view diff] no match in snippet view article find links to article

has poor sensitivity in low GC regions or genomes with high variance in GC content. Sono-Seq: Identical to ChIP-Seq but without the immunoprecipitation step

Off-target genome editing (6,822 words) [view diff] no match in snippet view article find links to article

study, Ren et al. observed a link between mutagenesis efficiency and GC content of sgRNA. At least 4-6bp adjacent to the PAM are required for a good edit

Single-cell sequencing (8,559 words) [view diff] no match in snippet view article find links to article

However, different PCR efficiency on particular sequences (for instance, GC content and snapback structure) may also be exponentially amplified, producing

Aganirsen (888 words) [view diff] no match in snippet view article find links to article

molecular mass of 8036 (Da), a melting point of approximately 64.2 °C, and a GC content of 64%. Aganirsen is highly soluble in water. IRS-1 is an intracellular

ChIL-sequencing (1,060 words) [view diff] no match in snippet view article find links to article

has poor sensitivity in low GC regions or genomes with high variance in GC content. ChIL-Seq requires numerous laboratory steps and takes longer than other

Thrifty gene hypothesis (3,535 words) [view diff] no match in snippet view article find links to article

signatures at a higher rate than in random genes selected for matched GC content and recombination rate. These two papers provide strong evidence against

MAGIChip (2,376 words) [view diff] no match in snippet view article find links to article

interpretation of the hybridization pattern are excluded on the basis of AT vs GC content, and the propensity to form hairpins and other types of stable secondary

Terriglobus roseus (827 words) [view diff] no match in snippet view article find links to article

genome of T. roseus is nearly 5.25 million base pairs long with a 60% GC content. Its genome has an interestingly high percentage of repeat sequences at

Sphingobacterium olei (1,149 words) [view diff] no match in snippet view article find links to article

base pairs, which contains 4737 protein-coding genes and has a 40.6% GC content. Sphingobacterium olei shared 98.3% genetic similarity to S. alkalisoli

In vitro compartmentalization (2,195 words) [view diff] no match in snippet view article find links to article

between DNA molecule and streptavidin-fused peptides, and used a low GC content synthetic streptavidin gene to increase efficiency and specificity during

Ridge (biology) (3,470 words) [view diff] no match in snippet view article

human transcriptome map reveals extremes in gene density, intron length, GC content, and repeat pattern for domains of highly and weakly expressed genes"

Non B-DNA (794 words) [view diff] exact match in snippet view article find links to article

alternating purine-pyrimidine sequence and can form in regions of DNA with high GC-content, supercoiling, or negative superhelicity. Z-DNA has been implicated in

Spizellomyces punctatus (2,435 words) [view diff] no match in snippet view article find links to article

of Multicellularity project. Its genome size is about 24.13 Mb with a GC content of 47.6%. The genome has 9,424 predicted transcripts and 8,952 predicted

Community fingerprinting (3,308 words) [view diff] no match in snippet view article find links to article

longer migrate through the gel. A GC clamp (about 40 bases with high GC content) is used as a special primer to anchor the PCR fragments together once

Vampirovibrio chlorellavorus (1,778 words) [view diff] no match in snippet view article find links to article

V. chlorellavorus has approximately 26 contigs, 2.91 Mbp, an average GC content of 51.4%, and 2 circular plasmids. In keeping with its description as

Adaptive evolution in the human genome (4,272 words) [view diff] exact match in snippet view article find links to article

273–277 Galtier, N., Piganeau, G., Mouchiroud, D., and Duret, L. (2001), GC-content evolution in mammalian genomes: the biased gene conversion hypothesis

List of RNA structure prediction software (8,423 words) [view diff] no match in snippet view article find links to article

of RNA-ensign that can specifically design sequences with a specified GC content using a GC-weighted Boltzmann ensemble and stochastic backtracking Source

Epigenetic regulation of neurogenesis (5,725 words) [view diff] no match in snippet view article find links to article

responsible for amyloid plaque formation, App. This gene has very high GC content in its promoter region, meaning that it is highly susceptible to DNA methylation

Sulfurimonas (4,366 words) [view diff] no match in snippet view article find links to article

10-60 g L−1 NaCl (optimum at 30 g L−1) . Its genome consists of 34.9% GC content, 2,290 protein-coding genes, and 42 RNA genes (3 rRNA genes). Its major

Secreted frizzled-related protein 1 (6,317 words) [view diff] no match in snippet view article find links to article

and axin or as a gain-of-function mutation of CTNNB1 (B-catenin). The GC content of the SFRP1 promoter in humans is 56.3%. It has been found that the overexpression

TM7x (4,029 words) [view diff] no match in snippet view article find links to article

haemolysin toxin protein as well as type III secretion protein. The GC content of the genome is 44.5%. A list of all the core genes, shared by all genomes

Genome-wide CRISPR-Cas9 knockout screens (6,164 words) [view diff] no match in snippet view article find links to article

selected for. On- and off-target activity should be analysed, as should GC content, and homopolymer stretches should be avoided. The most commonly used Cas9

Alteromonas macleodii (4,760 words) [view diff] no match in snippet view article find links to article

Alteromonas macleodii has an estimated 4400 total genes with about 47% GC content. Its pangenome is vast, there is significant variation in functional genetic